Gene name: PDR3
Reference locus (S288C): YBL005W
Gene biotype: protein_coding
Description: Transcription factor PDR3; Transcriptional activator of the pleiotropic drug resistance network; regulates expression of ATP-binding cassette (ABC) transporters through binding to cis-acting PDRE sites (PDR responsive elements); has a role in response to drugs and organic solvents; post-translationally up-regulated in cells lacking functional mitochondrial genome; involved in diauxic shift; relative distribution to nucleus increases upon DNA replication stress; APCC(Cdh1) substrate
Top 10 interactors (score): PDR5 (0.974); SNQ2 (0.944); PDR1 (0.93); YRR1 (0.926); YOR1 (0.918); PDR15 (0.9); GAL11 (0.893); STB5 (0.868); YAP1 (0.868); SSZ1 (0.86); RPN4 (0.84); PDR10 (0.813); FLR1 (0.81); DDI1 (0.784); HXT14 (0.782); IPT1 (0.782); HXT9 (0.782); HXT11 (0.78); TPO1 (0.766); PDR8 (0.76)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:211530-214460:+ | gene-YBL005W_AKU4011 | rna-NM_001178245.1_AKU4011 | cds-NP_009548.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:201896-204826:+ | gene-YBL005W_BG1 | rna-NM_001178245.1_BG1 | cds-NP_009548.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:212233-215163:+ | gene-YBL005W_Bruggeman | rna-NM_001178245.1_Bruggeman | cds-NP_009548.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:214766-217696:+ | gene-YBL005W_CAT1 | rna-NM_001178245.1_CAT1 | cds-NP_009548.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:203818-206748:+ | gene-YBL005W_CBS1585 | rna-NM_001178245.1_CBS1585 | cds-NP_009548.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:212068-214998:+ | gene-YBL005W_CBS436 | rna-NM_001178245.1_CBS436 | cds-NP_009548.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:302318-305248:+ | gene-YBL005W_CBS6412 | rna-NM_001178245.1_CBS6412 | cds-NP_009548.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:209183-212113:+ | gene-YBL005W_CBS6413 | rna-NM_001178245.1_CBS6413 | cds-NP_009548.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:211236-214166:+ | gene-YBL005W_CENPK1137D | rna-NM_001178245.1_CENPK1137D | cds-NP_009548.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:338775-341705:+ | gene-YBL005W_EthanolRed | rna-NM_001178245.1_EthanolRed | cds-NP_009548.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:226376-229306:+ | gene-YBL005W_FaliES1 | rna-NM_001178245.1_FaliES1 | cds-NP_009548.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:67785-70715:- | gene-YBL005W_JAY291 | rna-NM_001178245.1_JAY291 | cds-NP_009548.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:212831-215761:+ | gene-YBL005W_MUCL30387 | rna-NM_001178245.1_MUCL30387 | cds-NP_009548.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:212771-215701:+ | gene-YBL005W_MUCL30388 | rna-NM_001178245.1_MUCL30388 | cds-NP_009548.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:203799-206729:+ | gene-YBL005W_MUCL39482 | rna-NM_001178245.1_MUCL39482 | cds-NP_009548.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:211240-214170:+ | gene-YBL005W_MUCL42920 | rna-NM_001178245.1_MUCL42920 | cds-NP_009548.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:217267-220197:+ | gene-YBL005W_NCIM3186 | rna-NM_001178245.1_NCIM3186 | cds-NP_009548.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:204974-207904:+ | gene-YBL005W_NCYC1407 | rna-NM_001178245.1_NCYC1407 | cds-NP_009548.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:217143-220073:+ | gene-YBL005W_PE2H3 | rna-NM_001178245.1_PE2H3 | cds-NP_009548.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:214795-217725:+ | gene-YBL005W_PE2H4 | rna-NM_001178245.1_PE2H4 | cds-NP_009548.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:217470-220400:+ | gene-YBL005W_S288C | rna-NM_001178245.1_S288C | cds-NP_009548.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:76455-79385:- | gene-YBL005W_SA1 | rna-NM_001178245.1_SA1 | cds-NP_009548.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:226331-229261:+ | gene-YBL005W_ThermosaccDry | rna-NM_001178245.1_ThermosaccDry | cds-NP_009548.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:208483-211413:+ | gene-YBL005W_VR1 | rna-NM_001178245.1_VR1 | cds-NP_009548.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:202565-205495:+ | gene-YBL005W_ZTW1 | rna-NM_001178245.1_ZTW1 | cds-NP_009548.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:238131-241049:+ | gene-YBL005W_Sparadoxus | rna-NM_001178245.1_Sparadoxus | cds-NP_009548.1_Sparadoxus | 88.4 | 99.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |