Gene name: PDR17
Reference locus (S288C): YNL264C
Gene biotype: protein_coding
Description: Phosphatidylinositol transfer protein (PITP); downregulates Plb1p-mediated turnover of phosphatidylcholine; forms a complex with Psd2p which appears essential for maintenance of vacuolar PE levels; found in the cytosol and microsomes; homologous to Pdr16p; deletion affects phospholipid composition
Top 10 interactors (score): PSD2 (0.926); SFH5 (0.923); PBI1 (0.911); SEC14 (0.854); STT4 (0.744); PIK1 (0.677); SCS2 (0.592); GPN3 (0.584); PDR1 (0.526); YEA4 (0.523); DTR1 (0.497); CIS1 (0.497); PDX3 (0.483); PRM7 (0.483); NVJ2 (0.48); RPS20 (0.474); PDR12 (0.468); PEP12 (0.466); PSD1 (0.454); PDR3 (0.453)
Homologues (species, bitscore): AT1G75170 (Arabidopsis thaliana, 105.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:139339-140391:- | gene-YNL264C_AKU4011 | rna-NM_001183102.1_AKU4011 | cds-NP_014135.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:43297-44349:- | gene-YNL264C_BG1 | rna-NM_001183102.1_BG1 | cds-NP_014135.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:149160-150212:- | gene-YNL264C_Bruggeman | rna-NM_001183102.1_Bruggeman | cds-NP_014135.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:156456-157508:- | gene-YNL264C_CAT1 | rna-NM_001183102.1_CAT1 | cds-NP_014135.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:139739-140791:- | gene-YNL264C_CBS1585 | rna-NM_001183102.1_CBS1585 | cds-NP_014135.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:134836-135888:- | gene-YNL264C_CBS436 | rna-NM_001183102.1_CBS436 | cds-NP_014135.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:136150-137202:- | gene-YNL264C_CBS6412 | rna-NM_001183102.1_CBS6412 | cds-NP_014135.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:136432-137484:- | gene-YNL264C_CBS6413 | rna-NM_001183102.1_CBS6413 | cds-NP_014135.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:139383-140435:- | gene-YNL264C_CENPK1137D | rna-NM_001183102.1_CENPK1137D | cds-NP_014135.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:136984-138036:- | gene-YNL264C_EthanolRed | rna-NM_001183102.1_EthanolRed | cds-NP_014135.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:131721-132773:- | gene-YNL264C_FaliES1 | rna-NM_001183102.1_FaliES1 | cds-NP_014135.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:42895-43947:- | gene-YNL264C_JAY291 | rna-NM_001183102.1_JAY291 | cds-NP_014135.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:144948-146000:- | gene-YNL264C_MUCL30387 | rna-NM_001183102.1_MUCL30387 | cds-NP_014135.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:143526-144578:- | gene-YNL264C_MUCL30388 | rna-NM_001183102.1_MUCL30388 | cds-NP_014135.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:137229-138281:- | gene-YNL264C_MUCL39482 | rna-NM_001183102.1_MUCL39482 | cds-NP_014135.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:139498-140550:- | gene-YNL264C_MUCL42920 | rna-NM_001183102.1_MUCL42920 | cds-NP_014135.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:145532-146584:- | gene-YNL264C_NCIM3186 | rna-NM_001183102.1_NCIM3186 | cds-NP_014135.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:139330-140382:- | gene-YNL264C_NCYC1407 | rna-NM_001183102.1_NCYC1407 | cds-NP_014135.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:136231-137283:- | gene-YNL264C_PE2H3 | rna-NM_001183102.1_PE2H3 | cds-NP_014135.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:135619-136671:- | gene-YNL264C_PE2H4 | rna-NM_001183102.1_PE2H4 | cds-NP_014135.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:145563-146615:- | gene-YNL264C_S288C | rna-NM_001183102.1_S288C | cds-NP_014135.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000034.1:42965-44017:- | gene-YNL264C_SA1 | rna-NM_001183102.1_SA1 | cds-NP_014135.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:132578-133630:- | gene-YNL264C_ThermosaccDry | rna-NM_001183102.1_ThermosaccDry | cds-NP_014135.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:151490-152542:- | gene-YNL264C_VR1 | rna-NM_001183102.1_VR1 | cds-NP_014135.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:42914-43966:- | gene-YNL264C_ZTW1 | rna-NM_001183102.1_ZTW1 | cds-NP_014135.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:142769-143821:- | gene-YNL264C_Sparadoxus | rna-NM_001183102.1_Sparadoxus | cds-NP_014135.1_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |