PDR10 (YOR328W)


Gene profile

Gene name: PDR10
Reference locus (S288C): YOR328W
Gene biotype: protein_coding

Description: ATP-dependent permease PDR10; ATP-binding cassette (ABC) transporter; multidrug transporter involved in the pleiotropic drug resistance network; regulated by Pdr1p and Pdr3p

Top 10 interactors (score): YOR1 (0.91); PDR15 (0.86); PDR5 (0.855); IPT1 (0.842); PDR1 (0.813); PDR3 (0.813); HXT9 (0.796); FLR1 (0.796); HXT14 (0.796); HXT11 (0.795); DDI1 (0.785); YCF1 (0.78); TPO1 (0.743); AZR1 (0.723); AYT1 (0.71); ZRC1 (0.683); SSZ1 (0.672); CCA1 (0.662); NFT1 (0.603); QDR3 (0.591)

Homologues (species, bitscore): ABCG2 (Homo sapiens, 218.4); Abcg2 (Mus musculus, 199.9); abcg2a (Danio rerio, 207.2); abcg2 (Xenopus tropicalis, 215.3); w (Drosophila melanogaster, 192.6); wht-6 (Caenorhabditis elegans, 197.2); ABCG36 (Arabidopsis thaliana, 481.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:922300-926994:+ gene-YOR328W_AKU4011 rna-NM_001183748.1_AKU4011 cds-NP_014973.1_AKU4011 99.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:324355-329049:+ gene-YOR328W_BG1 rna-NM_001183748.1_BG1 cds-NP_014973.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:907708-912402:+ gene-YOR328W_Bruggeman rna-NM_001183748.1_Bruggeman cds-NP_014973.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:908423-913117:+ gene-YOR328W_CAT1 rna-NM_001183748.1_CAT1 cds-NP_014973.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:906123-910817:+ gene-YOR328W_CBS1585 rna-NM_001183748.1_CBS1585 cds-NP_014973.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:903939-908633:+ gene-YOR328W_CBS436 rna-NM_001183748.1_CBS436 cds-NP_014973.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:901833-906527:+ gene-YOR328W_CBS6412 rna-NM_001183748.1_CBS6412 cds-NP_014973.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:910962-915656:+ gene-YOR328W_CBS6413 rna-NM_001183748.1_CBS6413 cds-NP_014973.1_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:931578-936272:+ gene-YOR328W_CENPK1137D rna-NM_001183748.1_CENPK1137D cds-NP_014973.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:898215-902909:+ gene-YOR328W_EthanolRed rna-NM_001183748.1_EthanolRed cds-NP_014973.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:903838-908532:+ gene-YOR328W_FaliES1 rna-NM_001183748.1_FaliES1 cds-NP_014973.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000078.1:94737-99431:- gene-YOR328W_JAY291 rna-NM_001183748.1_JAY291 cds-NP_014973.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:912193-916887:+ gene-YOR328W_MUCL30387 rna-NM_001183748.1_MUCL30387 cds-NP_014973.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:919964-924658:+ gene-YOR328W_MUCL30388 rna-NM_001183748.1_MUCL30388 cds-NP_014973.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:912668-917362:+ gene-YOR328W_MUCL39482 rna-NM_001183748.1_MUCL39482 cds-NP_014973.1_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:922123-926817:+ gene-YOR328W_MUCL42920 rna-NM_001183748.1_MUCL42920 cds-NP_014973.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:931692-936386:+ gene-YOR328W_NCIM3186 rna-NM_001183748.1_NCIM3186 cds-NP_014973.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:913668-918362:+ gene-YOR328W_NCYC1407 rna-NM_001183748.1_NCYC1407 cds-NP_014973.1_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:911888-916582:+ gene-YOR328W_PE2H3 rna-NM_001183748.1_PE2H3 cds-NP_014973.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:928240-932934:+ gene-YOR328W_PE2H4 rna-NM_001183748.1_PE2H4 cds-NP_014973.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:931803-936497:+ gene-YOR328W_S288C rna-NM_001183748.1_S288C cds-NP_014973.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:42131-46825:+ gene-YOR328W_SA1 rna-NM_001183748.1_SA1 cds-NP_014973.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:903021-907715:+ gene-YOR328W_ThermosaccDry rna-NM_001183748.1_ThermosaccDry cds-NP_014973.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:966308-971002:+ gene-YOR328W_VR1 rna-NM_001183748.1_VR1 cds-NP_014973.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:635892-640586:+ gene-YOR328W_ZTW1 rna-NM_001183748.1_ZTW1 cds-NP_014973.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:910230-914927:+ gene-YOR328W_Sparadoxus rna-NM_001183748.1_Sparadoxus cds-NP_014973.1_Sparadoxus 89.1 99.9 Verified 1 1 1 False True False False False

Additional files