Gene name: PDE2
Reference locus (S288C): YOR360C
Gene biotype: protein_coding
Description: 3',5'-cyclic-nucleotide phosphodiesterase 2; High-affinity cyclic AMP phosphodiesterase; component of the cAMP-dependent protein kinase signaling system, protects the cell from extracellular cAMP, contains readthrough motif surrounding termination codon
Top 10 interactors (score): PDE1 (0.999); CYR1 (0.998); BCY1 (0.986); TPK2 (0.985); TPK1 (0.984); TPK3 (0.982); RAS2 (0.975); GPA2 (0.966); MDN1 (0.962); IRA2 (0.939); ADE13 (0.923); ADO1 (0.923); GUK1 (0.921); GUA1 (0.901); ADK1 (0.901); HAM1 (0.901); ADK2 (0.901); FAP7 (0.9); APT1 (0.9); AMD1 (0.9)
Homologues (species, bitscore): PDE9A (Homo sapiens, 89.0); Pde9a (Mus musculus, 84.7); pde8b (Danio rerio, 87.8); pde4b (Xenopus tropicalis, 84.3); Pde8 (Drosophila melanogaster, 83.6); pde-6 (Caenorhabditis elegans, 94.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:999822-1001402:- | gene-YOR360C_AKU4011 | rna-NM_001183780.1_AKU4011 | cds-NP_015005.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000078.1:36997-38577:- | gene-YOR360C_BG1 | rna-NM_001183780.1_BG1 | cds-NP_015005.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:984641-986221:- | gene-YOR360C_Bruggeman | rna-NM_001183780.1_Bruggeman | cds-NP_015005.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:984469-986049:- | gene-YOR360C_CAT1 | rna-NM_001183780.1_CAT1 | cds-NP_015005.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:984232-985812:- | gene-YOR360C_CBS1585 | rna-NM_001183780.1_CBS1585 | cds-NP_015005.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:979052-980632:- | gene-YOR360C_CBS436 | rna-NM_001183780.1_CBS436 | cds-NP_015005.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:213534-215109:- | gene-YOR360C_CBS6412 | rna-NM_001183780.1_CBS6412 | cds-NP_015005.1_CBS6412 | 99.4 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:988505-990085:- | gene-YOR360C_CBS6413 | rna-NM_001183780.1_CBS6413 | cds-NP_015005.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:1013063-1014643:- | gene-YOR360C_CENPK1137D | rna-NM_001183780.1_CENPK1137D | cds-NP_015005.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:228531-230111:- | gene-YOR360C_EthanolRed | rna-NM_001183780.1_EthanolRed | cds-NP_015005.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:981360-982940:- | gene-YOR360C_FaliES1 | rna-NM_001183780.1_FaliES1 | cds-NP_015005.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:22735-24315:+ | gene-YOR360C_JAY291 | rna-NM_001183780.1_JAY291 | cds-NP_015005.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:993967-995547:- | gene-YOR360C_MUCL30387 | rna-NM_001183780.1_MUCL30387 | cds-NP_015005.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:1001994-1003574:- | gene-YOR360C_MUCL30388 | rna-NM_001183780.1_MUCL30388 | cds-NP_015005.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:990767-992347:- | gene-YOR360C_MUCL39482 | rna-NM_001183780.1_MUCL39482 | cds-NP_015005.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:998373-999953:- | gene-YOR360C_MUCL42920 | rna-NM_001183780.1_MUCL42920 | cds-NP_015005.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:1013130-1014710:- | gene-YOR360C_NCIM3186 | rna-NM_001183780.1_NCIM3186 | cds-NP_015005.1_NCIM3186 | 92.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:991775-993355:- | gene-YOR360C_NCYC1407 | rna-NM_001183780.1_NCYC1407 | cds-NP_015005.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:987034-988614:- | gene-YOR360C_PE2H3 | rna-NM_001183780.1_PE2H3 | cds-NP_015005.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:1003385-1004965:- | gene-YOR360C_PE2H4 | rna-NM_001183780.1_PE2H4 | cds-NP_015005.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:1013241-1014821:- | gene-YOR360C_S288C | rna-NM_001183780.1_S288C | cds-NP_015005.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:117768-119348:- | gene-YOR360C_SA1 | rna-NM_001183780.1_SA1 | cds-NP_015005.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:980530-982110:- | gene-YOR360C_ThermosaccDry | rna-NM_001183780.1_ThermosaccDry | cds-NP_015005.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:1041787-1043367:- | gene-YOR360C_VR1 | rna-NM_001183780.1_VR1 | cds-NP_015005.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:713260-714840:- | gene-YOR360C_ZTW1 | rna-NM_001183780.1_ZTW1 | cds-NP_015005.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:986714-988294:- | gene-YOR360C_Sparadoxus | rna-NM_001183780.1_Sparadoxus | cds-NP_015005.1_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |