Gene name: PCM1
Reference locus (S288C): YEL058W
Gene biotype: protein_coding
Description: Phosphoacetylglucosamine mutase pcm1; Essential N-acetylglucosamine-phosphate mutase; converts GlcNAc-6-P to GlcNAc-1-P, which is a precursor for the biosynthesis of chitin and for the formation of N-glycosylated mannoproteins and glycosylphosphatidylinositol anchors
Top 10 interactors (score): GNA1 (0.999); QRI1 (0.999); GFA1 (0.972); APN2 (0.968); PGM1 (0.913); UGP1 (0.913); PGM2 (0.913); PRM15 (0.899); DUG3 (0.883); YMR084W (0.882); URA6 (0.866); PGI1 (0.805); YHL012W (0.795); MGS1 (0.76); PSA1 (0.754); GLO2 (0.754); GLO4 (0.754); GAL10 (0.736); GPH1 (0.72); ADI1 (0.712)
Homologues (species, bitscore): PGM3 (Homo sapiens, 407.5); Pgm3 (Mus musculus, 417.5); pgm3 (Danio rerio, 442.2); pgm3 (Xenopus tropicalis, 423.7); nst (Drosophila melanogaster, 409.5); F21D5.1 (Caenorhabditis elegans, 380.9); DRT101 (Arabidopsis thaliana, 386.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:37657-39330:+ | gene-YEL058W_AKU4011 | rna-NM_001178873.1_AKU4011 | cds-NP_010856.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000075.1:41186-42859:- | gene-YEL058W_BG1 | rna-NM_001178873.1_BG1 | cds-NP_010856.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:41169-42842:+ | gene-YEL058W_Bruggeman | rna-NM_001178873.1_Bruggeman | cds-NP_010856.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:39599-41272:+ | gene-YEL058W_CAT1 | rna-NM_001178873.1_CAT1 | cds-NP_010856.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:37604-39277:+ | gene-YEL058W_CBS1585 | rna-NM_001178873.1_CBS1585 | cds-NP_010856.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:38657-40330:+ | gene-YEL058W_CBS436 | rna-NM_001178873.1_CBS436 | cds-NP_010856.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:37856-39529:+ | gene-YEL058W_CBS6412 | rna-NM_001178873.1_CBS6412 | cds-NP_010856.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:42498-44171:+ | gene-YEL058W_CBS6413 | rna-NM_001178873.1_CBS6413 | cds-NP_010856.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:41092-42765:+ | gene-YEL058W_CENPK1137D | rna-NM_001178873.1_CENPK1137D | cds-NP_010856.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:37415-39088:+ | gene-YEL058W_EthanolRed | rna-NM_001178873.1_EthanolRed | cds-NP_010856.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:37678-39351:+ | gene-YEL058W_FaliES1 | rna-NM_001178873.1_FaliES1 | cds-NP_010856.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000427.1:18706-20379:- | gene-YEL058W_JAY291 | rna-NM_001178873.1_JAY291 | cds-NP_010856.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:41608-43281:+ | gene-YEL058W_MUCL30387 | rna-NM_001178873.1_MUCL30387 | cds-NP_010856.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:37719-39392:+ | gene-YEL058W_MUCL30388 | rna-NM_001178873.1_MUCL30388 | cds-NP_010856.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:36971-38644:+ | gene-YEL058W_MUCL39482 | rna-NM_001178873.1_MUCL39482 | cds-NP_010856.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:41603-43276:+ | gene-YEL058W_MUCL42920 | rna-NM_001178873.1_MUCL42920 | cds-NP_010856.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:43251-44924:+ | gene-YEL058W_NCIM3186 | rna-NM_001178873.1_NCIM3186 | cds-NP_010856.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:42066-43739:+ | gene-YEL058W_NCYC1407 | rna-NM_001178873.1_NCYC1407 | cds-NP_010856.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:46077-47750:+ | gene-YEL058W_PE2H3 | rna-NM_001178873.1_PE2H3 | cds-NP_010856.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:41988-43661:+ | gene-YEL058W_PE2H4 | rna-NM_001178873.1_PE2H4 | cds-NP_010856.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:43252-44925:+ | gene-YEL058W_S288C | rna-NM_001178873.1_S288C | cds-NP_010856.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000053.1:41977-43650:- | gene-YEL058W_SA1 | rna-NM_001178873.1_SA1 | cds-NP_010856.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:38078-39751:+ | gene-YEL058W_ThermosaccDry | rna-NM_001178873.1_ThermosaccDry | cds-NP_010856.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:37280-38953:+ | gene-YEL058W_VR1 | rna-NM_001178873.1_VR1 | cds-NP_010856.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:37015-38688:+ | gene-YEL058W_ZTW1 | rna-NM_001178873.1_ZTW1 | cds-NP_010856.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:41350-43017:+ | gene-YEL058W_Sparadoxus | rna-NM_001178873.1_Sparadoxus | cds-NP_010856.1_Sparadoxus | 88.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |