PCL7 (YIL050W)


Gene profile

Gene name: PCL7
Reference locus (S288C): YIL050W
Gene biotype: protein_coding

Description: Pho85p cyclin of the Pho80p subfamily; forms a functional kinase complex with Pho85p which phosphorylates Mmr1p and is regulated by Pho81p; involved in glycogen metabolism, expression is cell-cycle regulated; PCL7 has a paralog, PCL6, that arose from the whole genome duplication

Top 10 interactors (score): PHO85 (0.997); PCL5 (0.948); CDC28 (0.937); PCL9 (0.935); CLG1 (0.935); PCL2 (0.935); PCL1 (0.916); PCL8 (0.815); PCL10 (0.806); PHO80 (0.79); GLC8 (0.785); CTK2 (0.785); PHO81 (0.781); CLB1 (0.75); PCL6 (0.74); CLN2 (0.731); CKS1 (0.731); CTK3 (0.72); CTK1 (0.72); SGV1 (0.72)

Homologues (species, bitscore): CYCP4;1 (Arabidopsis thaliana, 100.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:255745-256602:+ gene-YIL050W_AKU4011 rna-NM_001179400.3_AKU4011 cds-NP_012214.3_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000164.1:117181-118038:+ gene-YIL050W_BG1 rna-NM_001179400.3_BG1 cds-NP_012214.3_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:261996-262853:+ gene-YIL050W_Bruggeman rna-NM_001179400.3_Bruggeman cds-NP_012214.3_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:249658-250515:+ gene-YIL050W_CAT1 rna-NM_001179400.3_CAT1 cds-NP_012214.3_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:255570-256427:+ gene-YIL050W_CBS1585 rna-NM_001179400.3_CBS1585 cds-NP_012214.3_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005351.1:250868-251725:+ gene-YIL050W_CBS436 rna-NM_001179400.3_CBS436 cds-NP_012214.3_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005335.1:252185-253042:+ gene-YIL050W_CBS6412 rna-NM_001179400.3_CBS6412 cds-NP_012214.3_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:247736-248593:+ gene-YIL050W_CBS6413 rna-NM_001179400.3_CBS6413 cds-NP_012214.3_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001530.1:250620-251477:+ gene-YIL050W_CENPK1137D rna-NM_001179400.3_CENPK1137D cds-NP_012214.3_CENPK1137D 99.5 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005479.1:239659-240516:+ gene-YIL050W_EthanolRed rna-NM_001179400.3_EthanolRed cds-NP_012214.3_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:257198-258055:+ gene-YIL050W_FaliES1 rna-NM_001179400.3_FaliES1 cds-NP_012214.3_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000365.1:40824-41681:- gene-YIL050W_JAY291 rna-NM_001179400.3_JAY291 cds-NP_012214.3_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005415.1:258888-259745:+ gene-YIL050W_MUCL30387 rna-NM_001179400.3_MUCL30387 cds-NP_012214.3_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:255491-256348:+ gene-YIL050W_MUCL30388 rna-NM_001179400.3_MUCL30388 cds-NP_012214.3_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005287.1:256413-257270:+ gene-YIL050W_MUCL39482 rna-NM_001179400.3_MUCL39482 cds-NP_012214.3_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:259544-260401:+ gene-YIL050W_MUCL42920 rna-NM_001179400.3_MUCL42920 cds-NP_012214.3_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011818.1:258913-259770:+ gene-YIL050W_NCIM3186 rna-NM_001179400.3_NCIM3186 cds-NP_012214.3_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:260686-261543:+ gene-YIL050W_NCYC1407 rna-NM_001179400.3_NCYC1407 cds-NP_012214.3_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:253928-254785:+ gene-YIL050W_PE2H3 rna-NM_001179400.3_PE2H3 cds-NP_012214.3_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:248640-249497:+ gene-YIL050W_PE2H4 rna-NM_001179400.3_PE2H4 cds-NP_012214.3_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001141.2:258913-259770:+ gene-YIL050W_S288C rna-NM_001179400.3_S288C cds-NP_012214.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000031.1:66399-67256:- gene-YIL050W_SA1 rna-NM_001179400.3_SA1 cds-NP_012214.3_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:255867-256724:+ gene-YIL050W_ThermosaccDry rna-NM_001179400.3_ThermosaccDry cds-NP_012214.3_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005463.1:253045-253902:+ gene-YIL050W_VR1 rna-NM_001179400.3_VR1 cds-NP_012214.3_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000019.1:229710-230567:+ gene-YIL050W_ZTW1 rna-NM_001179400.3_ZTW1 cds-NP_012214.3_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047495.1:251825-252682:+ gene-YIL050W_Sparadoxus rna-NM_001179400.3_Sparadoxus cds-NP_012214.3_Sparadoxus 86.8 100.0 Verified 1 1 1 False True False False False

Additional files