Gene name: PCL6
Reference locus (S288C): YER059W
Gene biotype: protein_coding
Description: Pho85p cyclin of the Pho80p subfamily; forms the major Glc8p kinase together with Pcl7p and Pho85p; involved in the control of glycogen storage by Pho85p; stabilized by Elongin C binding; PCL6 has a paralog, PCL7, that arose from the whole genome duplication
Top 10 interactors (score): PHO85 (0.999); PCL8 (0.991); CDC28 (0.963); PCL5 (0.948); CLG1 (0.945); PCL9 (0.944); PCL2 (0.935); PHO80 (0.93); PCL1 (0.926); CTK2 (0.923); CLN2 (0.918); CKS1 (0.904); CLB1 (0.903); CTK1 (0.9); CTK3 (0.9); GLC8 (0.893); PCL10 (0.828); PCL7 (0.74); BUR2 (0.72); SGV1 (0.72)
Homologues (species, bitscore): CYCP4;1 (Arabidopsis thaliana, 72.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:266422-267684:+ | gene-YER059W_AKU4011 | rna-NM_001178950.1_AKU4011 | cds-NP_010980.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:158095-159357:- | gene-YER059W_BG1 | rna-NM_001178950.1_BG1 | cds-NP_010980.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:275732-276994:+ | gene-YER059W_Bruggeman | rna-NM_001178950.1_Bruggeman | cds-NP_010980.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:269373-270635:+ | gene-YER059W_CAT1 | rna-NM_001178950.1_CAT1 | cds-NP_010980.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:266278-267540:+ | gene-YER059W_CBS1585 | rna-NM_001178950.1_CBS1585 | cds-NP_010980.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:268184-269446:+ | gene-YER059W_CBS436 | rna-NM_001178950.1_CBS436 | cds-NP_010980.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:265748-267010:+ | gene-YER059W_CBS6412 | rna-NM_001178950.1_CBS6412 | cds-NP_010980.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:271754-273016:+ | gene-YER059W_CBS6413 | rna-NM_001178950.1_CBS6413 | cds-NP_010980.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:270482-271744:+ | gene-YER059W_CENPK1137D | rna-NM_001178950.1_CENPK1137D | cds-NP_010980.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:266762-268024:+ | gene-YER059W_EthanolRed | rna-NM_001178950.1_EthanolRed | cds-NP_010980.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:267215-268477:+ | gene-YER059W_FaliES1 | rna-NM_001178950.1_FaliES1 | cds-NP_010980.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000382.1:4024-5286:- | gene-YER059W_JAY291 | rna-NM_001178950.1_JAY291 | cds-NP_010980.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:271167-272429:+ | gene-YER059W_MUCL30387 | rna-NM_001178950.1_MUCL30387 | cds-NP_010980.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:266841-268103:+ | gene-YER059W_MUCL30388 | rna-NM_001178950.1_MUCL30388 | cds-NP_010980.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:265313-266575:+ | gene-YER059W_MUCL39482 | rna-NM_001178950.1_MUCL39482 | cds-NP_010980.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:272369-273631:+ | gene-YER059W_MUCL42920 | rna-NM_001178950.1_MUCL42920 | cds-NP_010980.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:272623-273885:+ | gene-YER059W_NCIM3186 | rna-NM_001178950.1_NCIM3186 | cds-NP_010980.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:270376-271638:+ | gene-YER059W_NCYC1407 | rna-NM_001178950.1_NCYC1407 | cds-NP_010980.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:281025-282287:+ | gene-YER059W_PE2H3 | rna-NM_001178950.1_PE2H3 | cds-NP_010980.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:270966-272228:+ | gene-YER059W_PE2H4 | rna-NM_001178950.1_PE2H4 | cds-NP_010980.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:272624-273886:+ | gene-YER059W_S288C | rna-NM_001178950.1_S288C | cds-NP_010980.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:59147-60409:+ | gene-YER059W_SA1 | rna-NM_001178950.1_SA1 | cds-NP_010980.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:268011-269273:+ | gene-YER059W_ThermosaccDry | rna-NM_001178950.1_ThermosaccDry | cds-NP_010980.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:267708-268970:+ | gene-YER059W_VR1 | rna-NM_001178950.1_VR1 | cds-NP_010980.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:265192-266454:+ | gene-YER059W_ZTW1 | rna-NM_001178950.1_ZTW1 | cds-NP_010980.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:269067-270326:+ | gene-YER059W_Sparadoxus | rna-NM_001178950.1_Sparadoxus | cds-NP_010980.1_Sparadoxus | 89.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |