Gene name: PCL2
Reference locus (S288C): YDL127W
Gene biotype: protein_coding
Description: PHO85 cyclin-2; Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; localizes to sites of polarized cell growth; PCL2 has a paralog, PCL9, that arose from the whole genome duplication
Top 10 interactors (score): PHO85 (0.995); CLG1 (0.945); PCL5 (0.937); PCL7 (0.935); CDC28 (0.935); PCL6 (0.935); PCL10 (0.926); PCL8 (0.926); PHO80 (0.926); PCL1 (0.895); SWI5 (0.874); CLB1 (0.867); CLN2 (0.854); PCL9 (0.813); CTK2 (0.785); CLN3 (0.756); RVS167 (0.743); CKS1 (0.731); CTK1 (0.73); SGV1 (0.729)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:219544-220470:+ | gene-YDL127W_AKU4011 | rna-NM_001180186.1_AKU4011 | cds-NP_010156.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:329511-330437:- | gene-YDL127W_BG1 | rna-NM_001180186.1_BG1 | cds-NP_010156.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:236697-237623:+ | gene-YDL127W_Bruggeman | rna-NM_001180186.1_Bruggeman | cds-NP_010156.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:233699-234625:+ | gene-YDL127W_CAT1 | rna-NM_001180186.1_CAT1 | cds-NP_010156.2_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:217809-218735:+ | gene-YDL127W_CBS1585 | rna-NM_001180186.1_CBS1585 | cds-NP_010156.2_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:234462-235388:+ | gene-YDL127W_CBS436 | rna-NM_001180186.1_CBS436 | cds-NP_010156.2_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:216234-217160:+ | gene-YDL127W_CBS6412 | rna-NM_001180186.1_CBS6412 | cds-NP_010156.2_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:235969-236895:+ | gene-YDL127W_CBS6413 | rna-NM_001180186.1_CBS6413 | cds-NP_010156.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:233699-234625:+ | gene-YDL127W_CENPK1137D | rna-NM_001180186.1_CENPK1137D | cds-NP_010156.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:230574-231500:+ | gene-YDL127W_EthanolRed | rna-NM_001180186.1_EthanolRed | cds-NP_010156.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:236544-237470:+ | gene-YDL127W_FaliES1 | rna-NM_001180186.1_FaliES1 | cds-NP_010156.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:6587-7513:+ | gene-YDL127W_JAY291 | rna-NM_001180186.1_JAY291 | cds-NP_010156.2_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:234752-235678:+ | gene-YDL127W_MUCL30387 | rna-NM_001180186.1_MUCL30387 | cds-NP_010156.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:225514-226440:+ | gene-YDL127W_MUCL30388 | rna-NM_001180186.1_MUCL30388 | cds-NP_010156.2_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:218911-219837:+ | gene-YDL127W_MUCL39482 | rna-NM_001180186.1_MUCL39482 | cds-NP_010156.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:140708-141634:+ | gene-YDL127W_MUCL42920 | rna-NM_001180186.1_MUCL42920 | cds-NP_010156.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:234850-235776:+ | gene-YDL127W_NCIM3186 | rna-NM_001180186.1_NCIM3186 | cds-NP_010156.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:218942-219868:+ | gene-YDL127W_NCYC1407 | rna-NM_001180186.1_NCYC1407 | cds-NP_010156.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:225688-226614:+ | gene-YDL127W_PE2H3 | rna-NM_001180186.1_PE2H3 | cds-NP_010156.2_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:225692-226618:+ | gene-YDL127W_PE2H4 | rna-NM_001180186.1_PE2H4 | cds-NP_010156.2_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:234927-235853:+ | gene-YDL127W_S288C | rna-NM_001180186.1_S288C | cds-NP_010156.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:199071-199997:- | gene-YDL127W_SA1 | rna-NM_001180186.1_SA1 | cds-NP_010156.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:236055-236981:+ | gene-YDL127W_ThermosaccDry | rna-NM_001180186.1_ThermosaccDry | cds-NP_010156.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:238162-239088:+ | gene-YDL127W_VR1 | rna-NM_001180186.1_VR1 | cds-NP_010156.2_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:233985-234911:+ | gene-YDL127W_ZTW1 | rna-NM_001180186.1_ZTW1 | cds-NP_010156.2_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:236091-237020:+ | gene-YDL127W_Sparadoxus | rna-NM_001180186.1_Sparadoxus | cds-NP_010156.2_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |