Gene name: PCL1
Reference locus (S288C): YNL289W
Gene biotype: protein_coding
Description: PHO85 cyclin-1; Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; is ubiquitinated by Dma1p; phosphorylation by Pho85p targets it for degradation; localizes to sites of polarized cell growth
Top 10 interactors (score): PHO85 (0.999); YOX1 (0.95); CDC28 (0.948); CLG1 (0.935); PCL10 (0.926); PHO80 (0.926); PCL6 (0.926); PCL8 (0.925); PCL7 (0.916); PCL2 (0.895); HMS1 (0.892); CLB1 (0.839); PCL9 (0.833); CLN3 (0.818); CLN1 (0.816); CLN2 (0.806); PCL5 (0.801); YHP1 (0.787); CTK2 (0.785); SWI4 (0.773)
Homologues (species, bitscore): CYCP3;2 (Arabidopsis thaliana, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:81715-82554:+ | gene-YNL289W_AKU4011 | rna-NM_001183127.1_AKU4011 | cds-NP_014110.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000074.1:8096-8935:- | gene-YNL289W_BG1 | rna-NM_001183127.1_BG1 | cds-NP_014110.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:91057-91896:+ | gene-YNL289W_Bruggeman | rna-NM_001183127.1_Bruggeman | cds-NP_014110.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:93663-94502:+ | gene-YNL289W_CAT1 | rna-NM_001183127.1_CAT1 | cds-NP_014110.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:82045-82884:+ | gene-YNL289W_CBS1585 | rna-NM_001183127.1_CBS1585 | cds-NP_014110.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:82530-83369:+ | gene-YNL289W_CBS436 | rna-NM_001183127.1_CBS436 | cds-NP_014110.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:78702-79541:+ | gene-YNL289W_CBS6412 | rna-NM_001183127.1_CBS6412 | cds-NP_014110.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:78893-79732:+ | gene-YNL289W_CBS6413 | rna-NM_001183127.1_CBS6413 | cds-NP_014110.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:81730-82569:+ | gene-YNL289W_CENPK1137D | rna-NM_001183127.1_CENPK1137D | cds-NP_014110.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:78731-79570:+ | gene-YNL289W_EthanolRed | rna-NM_001183127.1_EthanolRed | cds-NP_014110.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:79630-80469:+ | gene-YNL289W_FaliES1 | rna-NM_001183127.1_FaliES1 | cds-NP_014110.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000171.1:7750-8589:- | gene-YNL289W_JAY291 | rna-NM_001183127.1_JAY291 | cds-NP_014110.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:91556-92395:+ | gene-YNL289W_MUCL30387 | rna-NM_001183127.1_MUCL30387 | cds-NP_014110.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:84337-85176:+ | gene-YNL289W_MUCL30388 | rna-NM_001183127.1_MUCL30388 | cds-NP_014110.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:79679-80518:+ | gene-YNL289W_MUCL39482 | rna-NM_001183127.1_MUCL39482 | cds-NP_014110.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:81366-82205:+ | gene-YNL289W_MUCL42920 | rna-NM_001183127.1_MUCL42920 | cds-NP_014110.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:87866-88705:+ | gene-YNL289W_NCIM3186 | rna-NM_001183127.1_NCIM3186 | cds-NP_014110.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:81011-81850:+ | gene-YNL289W_NCYC1407 | rna-NM_001183127.1_NCYC1407 | cds-NP_014110.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:78206-79045:+ | gene-YNL289W_PE2H3 | rna-NM_001183127.1_PE2H3 | cds-NP_014110.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:77594-78433:+ | gene-YNL289W_PE2H4 | rna-NM_001183127.1_PE2H4 | cds-NP_014110.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:87897-88736:+ | gene-YNL289W_S288C | rna-NM_001183127.1_S288C | cds-NP_014110.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000052.1:8482-9321:- | gene-YNL289W_SA1 | rna-NM_001183127.1_SA1 | cds-NP_014110.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:80487-81326:+ | gene-YNL289W_ThermosaccDry | rna-NM_001183127.1_ThermosaccDry | cds-NP_014110.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:93025-93864:+ | gene-YNL289W_VR1 | rna-NM_001183127.1_VR1 | cds-NP_014110.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000029.1:71698-72537:+ | gene-YNL289W_ZTW1 | rna-NM_001183127.1_ZTW1 | cds-NP_014110.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:89730-90569:+ | gene-YNL289W_Sparadoxus | rna-NM_001183127.1_Sparadoxus | cds-NP_014110.1_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |