Gene name: PCK1
Reference locus (S288C): YKR097W
Gene biotype: protein_coding
Description: Phosphoenolpyruvate carboxykinase (atp); Phosphoenolpyruvate carboxykinase; key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol
Top 10 interactors (score): FBP1 (0.999); MLS1 (0.999); ICL1 (0.996); CDC19 (0.995); PYC2 (0.995); PYC1 (0.995); MDH2 (0.992); ACS1 (0.987); SFC1 (0.986); IDP2 (0.981); MDH1 (0.98); MDH3 (0.978); CIT1 (0.966); CIT2 (0.964); CIT3 (0.963); PDB1 (0.961); ENO1 (0.957); ENO2 (0.957); PFK1 (0.956); DAL7 (0.953)
Homologues (species, bitscore): PCK1 (Arabidopsis thaliana, 614.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:617092-618741:+ | gene-YKR097W_AKU4011 | rna-NM_001179887.3_AKU4011 | cds-NP_013023.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:25401-27050:- | gene-YKR097W_BG1 | rna-NM_001179887.3_BG1 | cds-NP_013023.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:639708-641357:+ | gene-YKR097W_Bruggeman | rna-NM_001179887.3_Bruggeman | cds-NP_013023.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:637260-638909:+ | gene-YKR097W_CAT1 | rna-NM_001179887.3_CAT1 | cds-NP_013023.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:629581-631230:+ | gene-YKR097W_CBS1585 | rna-NM_001179887.3_CBS1585 | cds-NP_013023.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:627985-629634:+ | gene-YKR097W_CBS436 | rna-NM_001179887.3_CBS436 | cds-NP_013023.3_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:612871-614520:+ | gene-YKR097W_CBS6412 | rna-NM_001179887.3_CBS6412 | cds-NP_013023.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:629401-631050:+ | gene-YKR097W_CBS6413 | rna-NM_001179887.3_CBS6413 | cds-NP_013023.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:630809-632458:+ | gene-YKR097W_CENPK1137D | rna-NM_001179887.3_CENPK1137D | cds-NP_013023.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:626987-628636:+ | gene-YKR097W_EthanolRed | rna-NM_001179887.3_EthanolRed | cds-NP_013023.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:630883-632532:+ | gene-YKR097W_FaliES1 | rna-NM_001179887.3_FaliES1 | cds-NP_013023.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:12442-14091:- | gene-YKR097W_JAY291 | rna-NM_001179887.3_JAY291 | cds-NP_013023.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:639224-640873:+ | gene-YKR097W_MUCL30387 | rna-NM_001179887.3_MUCL30387 | cds-NP_013023.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:633528-635177:+ | gene-YKR097W_MUCL30388 | rna-NM_001179887.3_MUCL30388 | cds-NP_013023.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:628420-630069:+ | gene-YKR097W_MUCL39482 | rna-NM_001179887.3_MUCL39482 | cds-NP_013023.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:634474-636123:+ | gene-YKR097W_MUCL42920 | rna-NM_001179887.3_MUCL42920 | cds-NP_013023.3_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:631141-632790:+ | gene-YKR097W_NCIM3186 | rna-NM_001179887.3_NCIM3186 | cds-NP_013023.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:628837-630486:+ | gene-YKR097W_NCYC1407 | rna-NM_001179887.3_NCYC1407 | cds-NP_013023.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:654084-655733:+ | gene-YKR097W_PE2H3 | rna-NM_001179887.3_PE2H3 | cds-NP_013023.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:638521-640170:+ | gene-YKR097W_PE2H4 | rna-NM_001179887.3_PE2H4 | cds-NP_013023.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:631152-632801:+ | gene-YKR097W_S288C | rna-NM_001179887.3_S288C | cds-NP_013023.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:49012-50661:- | gene-YKR097W_SA1 | rna-NM_001179887.3_SA1 | cds-NP_013023.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:630129-631778:+ | gene-YKR097W_ThermosaccDry | rna-NM_001179887.3_ThermosaccDry | cds-NP_013023.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:629410-631059:+ | gene-YKR097W_VR1 | rna-NM_001179887.3_VR1 | cds-NP_013023.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:627093-628742:+ | gene-YKR097W_ZTW1 | rna-NM_001179887.3_ZTW1 | cds-NP_013023.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:652453-654102:+ | gene-YKR097W_Sparadoxus | rna-NM_001179887.3_Sparadoxus | cds-NP_013023.3_Sparadoxus | 92.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |