Gene name: PCC1
Reference locus (S288C): YKR095W-A
Gene biotype: protein_coding
Description: Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; other complex members are Kae1p, Gon7p, Bud32p, and Cgi121p
Top 10 interactors (score): GON7 (0.999); KAE1 (0.995); BUD32 (0.99); CGI121 (0.99); QRI7 (0.882); TIF5 (0.774); SUA5 (0.715); TRM1 (0.683); PUS1 (0.683); THR1 (0.681); HOM2 (0.678); THR4 (0.62); ADE8 (0.573); GCN2 (0.51); PUF3 (0.463)
Homologues (species, bitscore): lage3 (Danio rerio, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:611798-612139:+ | gene-YKR095W-A_AKU4011 | rna-NM_001184522.3_AKU4011 | cds-NP_878113.4_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:31997-32338:- | gene-YKR095W-A_BG1 | rna-NM_001184522.3_BG1 | cds-NP_878113.4_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:634415-634756:+ | gene-YKR095W-A_Bruggeman | rna-NM_001184522.3_Bruggeman | cds-NP_878113.4_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:631700-632041:+ | gene-YKR095W-A_CAT1 | rna-NM_001184522.3_CAT1 | cds-NP_878113.4_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:624288-624629:+ | gene-YKR095W-A_CBS1585 | rna-NM_001184522.3_CBS1585 | cds-NP_878113.4_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:622701-623042:+ | gene-YKR095W-A_CBS436 | rna-NM_001184522.3_CBS436 | cds-NP_878113.4_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:607577-607918:+ | gene-YKR095W-A_CBS6412 | rna-NM_001184522.3_CBS6412 | cds-NP_878113.4_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:624107-624448:+ | gene-YKR095W-A_CBS6413 | rna-NM_001184522.3_CBS6413 | cds-NP_878113.4_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:625522-625863:+ | gene-YKR095W-A_CENPK1137D | rna-NM_001184522.3_CENPK1137D | cds-NP_878113.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:621691-622032:+ | gene-YKR095W-A_EthanolRed | rna-NM_001184522.3_EthanolRed | cds-NP_878113.4_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:625587-625928:+ | gene-YKR095W-A_FaliES1 | rna-NM_001184522.3_FaliES1 | cds-NP_878113.4_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:19041-19382:- | gene-YKR095W-A_JAY291 | rna-NM_001184522.3_JAY291 | cds-NP_878113.4_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:633929-634270:+ | gene-YKR095W-A_MUCL30387 | rna-NM_001184522.3_MUCL30387 | cds-NP_878113.4_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:628242-628583:+ | gene-YKR095W-A_MUCL30388 | rna-NM_001184522.3_MUCL30388 | cds-NP_878113.4_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:623126-623467:+ | gene-YKR095W-A_MUCL39482 | rna-NM_001184522.3_MUCL39482 | cds-NP_878113.4_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:629188-629529:+ | gene-YKR095W-A_MUCL42920 | rna-NM_001184522.3_MUCL42920 | cds-NP_878113.4_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:625853-626194:+ | gene-YKR095W-A_NCIM3186 | rna-NM_001184522.3_NCIM3186 | cds-NP_878113.4_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:623542-623883:+ | gene-YKR095W-A_NCYC1407 | rna-NM_001184522.3_NCYC1407 | cds-NP_878113.4_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:648793-649134:+ | gene-YKR095W-A_PE2H3 | rna-NM_001184522.3_PE2H3 | cds-NP_878113.4_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:633235-633576:+ | gene-YKR095W-A_PE2H4 | rna-NM_001184522.3_PE2H4 | cds-NP_878113.4_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:625864-626205:+ | gene-YKR095W-A_S288C | rna-NM_001184522.3_S288C | cds-NP_878113.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:55607-55948:- | gene-YKR095W-A_SA1 | rna-NM_001184522.3_SA1 | cds-NP_878113.4_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:624833-625174:+ | gene-YKR095W-A_ThermosaccDry | rna-NM_001184522.3_ThermosaccDry | cds-NP_878113.4_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:624097-624438:+ | gene-YKR095W-A_VR1 | rna-NM_001184522.3_VR1 | cds-NP_878113.4_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:621800-622141:+ | gene-YKR095W-A_ZTW1 | rna-NM_001184522.3_ZTW1 | cds-NP_878113.4_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:647193-647534:+ | gene-YKR095W-A_Sparadoxus | rna-NM_001184522.3_Sparadoxus | cds-NP_878113.4_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |