Gene name: PBR1
Reference locus (S288C): YNL181W
Gene biotype: protein_coding
Description: Uncharacterized oxidoreductase YNL181W; Putative oxidoreductase; required for cell viability; Belongs to the short-chain dehydrogenases/reductases (SDR) family
Top 10 interactors (score): YML131W (0.794); YLR352W (0.77); YOR338W (0.753); PXP2 (0.75); ANY1 (0.749); ALG1 (0.72); EMC6 (0.719); YKL071W (0.714); BDH2 (0.701); EMC2 (0.7); ARI1 (0.7); ARO2 (0.678); AAD14 (0.666); AAD4 (0.664); EMC1 (0.655); OST1 (0.651); VPS35 (0.637); SFA1 (0.619); AAD6 (0.581); OYE3 (0.578)
Homologues (species, bitscore): RDH14 (Homo sapiens, 105.5); Rdh14 (Mus musculus, 104.0); rdh12 (Danio rerio, 104.8); dhrs13 (Xenopus tropicalis, 84.0); CG30491 (Drosophila melanogaster, 103.6); dhs-24 (Caenorhabditis elegans, 85.9); AT2G37540 (Arabidopsis thaliana, 68.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:292086-293309:+ | gene-YNL181W_AKU4011 | rna-NM_001183019.2_AKU4011 | cds-NP_014218.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:196061-197284:+ | gene-YNL181W_BG1 | rna-NM_001183019.2_BG1 | cds-NP_014218.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:302118-303341:+ | gene-YNL181W_Bruggeman | rna-NM_001183019.2_Bruggeman | cds-NP_014218.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:344412-345635:+ | gene-YNL181W_CAT1 | rna-NM_001183019.2_CAT1 | cds-NP_014218.2_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:292729-293952:+ | gene-YNL181W_CBS1585 | rna-NM_001183019.2_CBS1585 | cds-NP_014218.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:361037-362260:+ | gene-YNL181W_CBS436 | rna-NM_001183019.2_CBS436 | cds-NP_014218.2_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:288143-289366:+ | gene-YNL181W_CBS6412 | rna-NM_001183019.2_CBS6412 | cds-NP_014218.2_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:289162-290385:+ | gene-YNL181W_CBS6413 | rna-NM_001183019.2_CBS6413 | cds-NP_014218.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:292163-293386:+ | gene-YNL181W_CENPK1137D | rna-NM_001183019.2_CENPK1137D | cds-NP_014218.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:289061-290284:+ | gene-YNL181W_EthanolRed | rna-NM_001183019.2_EthanolRed | cds-NP_014218.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:284974-286197:+ | gene-YNL181W_FaliES1 | rna-NM_001183019.2_FaliES1 | cds-NP_014218.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:32326-33549:- | gene-YNL181W_JAY291 | rna-NM_001183019.2_JAY291 | cds-NP_014218.2_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:297933-299156:+ | gene-YNL181W_MUCL30387 | rna-NM_001183019.2_MUCL30387 | cds-NP_014218.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:332252-333475:+ | gene-YNL181W_MUCL30388 | rna-NM_001183019.2_MUCL30388 | cds-NP_014218.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:289968-291191:+ | gene-YNL181W_MUCL39482 | rna-NM_001183019.2_MUCL39482 | cds-NP_014218.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:292357-293580:+ | gene-YNL181W_MUCL42920 | rna-NM_001183019.2_MUCL42920 | cds-NP_014218.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:298304-299527:+ | gene-YNL181W_NCIM3186 | rna-NM_001183019.2_NCIM3186 | cds-NP_014218.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:292062-293285:+ | gene-YNL181W_NCYC1407 | rna-NM_001183019.2_NCYC1407 | cds-NP_014218.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:289005-290228:+ | gene-YNL181W_PE2H3 | rna-NM_001183019.2_PE2H3 | cds-NP_014218.2_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:288393-289616:+ | gene-YNL181W_PE2H4 | rna-NM_001183019.2_PE2H4 | cds-NP_014218.2_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:298335-299558:+ | gene-YNL181W_S288C | rna-NM_001183019.2_S288C | cds-NP_014218.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:114048-115271:- | gene-YNL181W_SA1 | rna-NM_001183019.2_SA1 | cds-NP_014218.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:285831-287054:+ | gene-YNL181W_ThermosaccDry | rna-NM_001183019.2_ThermosaccDry | cds-NP_014218.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:304329-305552:+ | gene-YNL181W_VR1 | rna-NM_001183019.2_VR1 | cds-NP_014218.2_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:195658-196881:+ | gene-YNL181W_ZTW1 | rna-NM_001183019.2_ZTW1 | cds-NP_014218.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:296357-297580:+ | gene-YNL181W_Sparadoxus | rna-NM_001183019.2_Sparadoxus | cds-NP_014218.2_Sparadoxus | 91.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |