Gene name: PBN1
Reference locus (S288C): YCL052C
Gene biotype: protein_coding
Description: Protein PBN1; Component of glycosylphosphatidylinositol-mannosyltransferase I; essential component; required for the autocatalytic post-translational processing of the protease B precursor Prb1p; localizes to ER in lumenal orientation; homolog of mammalian PIG-X
Top 10 interactors (score): GPI18 (0.991); GPI10 (0.989); GPI14 (0.989); GWT1 (0.9); PUP1 (0.861); SMP3 (0.858); DPM1 (0.813); ALG3 (0.8); SPB1 (0.75); PMT5 (0.749); HOC1 (0.749); PMT3 (0.746); VAN1 (0.743); MNN11 (0.738); PMT4 (0.738); MNN10 (0.737); MNN9 (0.735); ANP1 (0.735); PMT2 (0.735); PGA1 (0.72)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:35424-36674:- | gene-YCL052C_AKU4011 | rna-NM_001178697.1_AKU4011 | cds-NP_009878.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000086.1:9152-10402:+ | gene-YCL052C_BG1 | rna-NM_001178697.1_BG1 | cds-NP_009878.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:23290-24540:- | gene-YCL052C_Bruggeman | rna-NM_001178697.1_Bruggeman | cds-NP_009878.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:35296-36546:- | gene-YCL052C_CAT1 | rna-NM_001178697.1_CAT1 | cds-NP_009878.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:36107-37357:- | gene-YCL052C_CBS1585 | rna-NM_001178697.1_CBS1585 | cds-NP_009878.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:34666-35916:- | gene-YCL052C_CBS436 | rna-NM_001178697.1_CBS436 | cds-NP_009878.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:23883-25133:- | gene-YCL052C_CBS6412 | rna-NM_001178697.1_CBS6412 | cds-NP_009878.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:34901-36151:- | gene-YCL052C_CBS6413 | rna-NM_001178697.1_CBS6413 | cds-NP_009878.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:33717-34967:- | gene-YCL052C_CENPK1137D | rna-NM_001178697.1_CENPK1137D | cds-NP_009878.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:33657-34907:- | gene-YCL052C_EthanolRed | rna-NM_001178697.1_EthanolRed | cds-NP_009878.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:34420-35670:- | gene-YCL052C_FaliES1 | rna-NM_001178697.1_FaliES1 | cds-NP_009878.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:48668-49918:+ | gene-YCL052C_JAY291 | rna-NM_001178697.1_JAY291 | cds-NP_009878.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:21893-23143:- | gene-YCL052C_MUCL30387 | rna-NM_001178697.1_MUCL30387 | cds-NP_009878.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:22152-23402:- | gene-YCL052C_MUCL30388 | rna-NM_001178697.1_MUCL30388 | cds-NP_009878.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:36494-37744:- | gene-YCL052C_MUCL39482 | rna-NM_001178697.1_MUCL39482 | cds-NP_009878.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:22684-23934:- | gene-YCL052C_MUCL42920 | rna-NM_001178697.1_MUCL42920 | cds-NP_009878.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:33775-35025:- | gene-YCL052C_NCIM3186 | rna-NM_001178697.1_NCIM3186 | cds-NP_009878.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:36816-38066:- | gene-YCL052C_NCYC1407 | rna-NM_001178697.1_NCYC1407 | cds-NP_009878.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:34589-35839:- | gene-YCL052C_PE2H3 | rna-NM_001178697.1_PE2H3 | cds-NP_009878.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:34546-35796:- | gene-YCL052C_PE2H4 | rna-NM_001178697.1_PE2H4 | cds-NP_009878.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:34143-35393:- | gene-YCL052C_S288C | rna-NM_001178697.1_S288C | cds-NP_009878.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:21270-22520:- | gene-YCL052C_SA1 | rna-NM_001178697.1_SA1 | cds-NP_009878.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:34738-35988:- | gene-YCL052C_ThermosaccDry | rna-NM_001178697.1_ThermosaccDry | cds-NP_009878.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:41074-42324:- | gene-YCL052C_VR1 | rna-NM_001178697.1_VR1 | cds-NP_009878.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:34964-36214:- | gene-YCL052C_ZTW1 | rna-NM_001178697.1_ZTW1 | cds-NP_009878.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:64610-65860:- | gene-YCL052C_Sparadoxus | rna-NM_001178697.1_Sparadoxus | cds-NP_009878.1_Sparadoxus | 90.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |