Gene name: PBA1
Reference locus (S288C): YLR199C
Gene biotype: protein_coding
Description: Proteasome chaperone 1; Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC1 constituent of the PAC1-PAC2 complex involved in proteasome assembly; Belongs to the PSMG1 family
Top 10 interactors (score): ADD66 (0.999); UMP1 (0.982); POC4 (0.975); PUP2 (0.965); IRC25 (0.943); PRE1 (0.938); PRE6 (0.919); PUP1 (0.908); PRE9 (0.902); BLM10 (0.894); PRE4 (0.886); PRE2 (0.882); PRE5 (0.863); PRE10 (0.863); PRE8 (0.853); PRE3 (0.829); PRE7 (0.825); RPN14 (0.818); NAS6 (0.818); HSM3 (0.813)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:501969-502885:- | gene-YLR199C_AKU4011 | rna-NM_001182086.1_AKU4011 | cds-NP_013300.2_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:59152-60067:- | gene-YLR199C_BG1 | rna-NM_001182086.1_BG1 | cds-NP_013300.2_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:542224-543140:- | gene-YLR199C_Bruggeman | rna-NM_001182086.1_Bruggeman | cds-NP_013300.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:541817-542733:- | gene-YLR199C_CAT1 | rna-NM_001182086.1_CAT1 | cds-NP_013300.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:537466-538382:- | gene-YLR199C_CBS1585 | rna-NM_001182086.1_CBS1585 | cds-NP_013300.2_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:527613-528529:- | gene-YLR199C_CBS436 | rna-NM_001182086.1_CBS436 | cds-NP_013300.2_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:506023-506939:- | gene-YLR199C_CBS6412 | rna-NM_001182086.1_CBS6412 | cds-NP_013300.2_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:537758-538674:- | gene-YLR199C_CBS6413 | rna-NM_001182086.1_CBS6413 | cds-NP_013300.2_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:532498-533414:- | gene-YLR199C_CENPK1137D | rna-NM_001182086.1_CENPK1137D | cds-NP_013300.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:501496-502412:- | gene-YLR199C_EthanolRed | rna-NM_001182086.1_EthanolRed | cds-NP_013300.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:530423-531339:- | gene-YLR199C_FaliES1 | rna-NM_001182086.1_FaliES1 | cds-NP_013300.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:57327-58243:- | gene-YLR199C_JAY291 | rna-NM_001182086.1_JAY291 | cds-NP_013300.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:542242-543158:- | gene-YLR199C_MUCL30387 | rna-NM_001182086.1_MUCL30387 | cds-NP_013300.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:547177-548093:- | gene-YLR199C_MUCL30388 | rna-NM_001182086.1_MUCL30388 | cds-NP_013300.2_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:538447-539363:- | gene-YLR199C_MUCL39482 | rna-NM_001182086.1_MUCL39482 | cds-NP_013300.2_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:538946-539862:- | gene-YLR199C_MUCL42920 | rna-NM_001182086.1_MUCL42920 | cds-NP_013300.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:547827-548743:- | gene-YLR199C_NCIM3186 | rna-NM_001182086.1_NCIM3186 | cds-NP_013300.2_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:530876-531792:- | gene-YLR199C_NCYC1407 | rna-NM_001182086.1_NCYC1407 | cds-NP_013300.2_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:535116-536032:- | gene-YLR199C_PE2H3 | rna-NM_001182086.1_PE2H3 | cds-NP_013300.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:534860-535776:- | gene-YLR199C_PE2H4 | rna-NM_001182086.1_PE2H4 | cds-NP_013300.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:547853-548769:- | gene-YLR199C_S288C | rna-NM_001182086.1_S288C | cds-NP_013300.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:57384-58300:- | gene-YLR199C_SA1 | rna-NM_001182086.1_SA1 | cds-NP_013300.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:532926-533842:- | gene-YLR199C_ThermosaccDry | rna-NM_001182086.1_ThermosaccDry | cds-NP_013300.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:544225-545141:- | gene-YLR199C_VR1 | rna-NM_001182086.1_VR1 | cds-NP_013300.2_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:57214-58130:- | gene-YLR199C_ZTW1 | rna-NM_001182086.1_ZTW1 | cds-NP_013300.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:519014-519925:- | gene-YLR199C_Sparadoxus | rna-NM_001182086.1_Sparadoxus | cds-NP_013300.2_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |