PAU9 (YBL108C-A)

Gene profile

Gene name: PAU9
Reference locus (S288C): YBL108C-A
Gene biotype: protein_coding

Description: Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:7695-7823:- gene-YBL108C-A_AKU4011 rna-NM_001184458.1_AKU4011 cds-NP_076873.1_AKU4011 100.0 100.0 Mismatch 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000118.1:3-131:+ gene-YBL108C-A_BG1 rna-NM_001184458.1_BG1 cds-NP_076873.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:7578-7706:- gene-YBL108C-A_Bruggeman rna-NM_001184458.1_Bruggeman cds-NP_076873.1_Bruggeman 100.0 100.0 Mismatch 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:59965-60093:+ gene-YBL108C-A_CAT1 rna-NM_001184458.1_CAT1 cds-NP_076873.1_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:1037415-1037543:+ gene-YBL108C-A_1_CBS1585 Unknown Unknown 100.0 100.0 Mismatch 2 2 1 Unknown Unknown Unknown Unknown Unknown
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:9510-9638:- gene-YBL108C-A_CBS1585 rna-NM_001184458.1_CBS1585 cds-NP_076873.1_CBS1585 100.0 100.0 Mismatch 2 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia MBVR01000064.1:347-475:- gene-YBL108C-A_CBS436 rna-NM_001184458.1_CBS436 cds-NP_076873.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia MBVQ01000083.1:8322-8450:- gene-YBL108C-A_CBS6412 rna-NM_001184458.1_CBS6412 cds-NP_076873.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:6077-6205:- gene-YBL108C-A_CBS6413 rna-NM_001184458.1_CBS6413 cds-NP_076873.1_CBS6413 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:1721-1849:- gene-YBL108C-A_CENPK1137D rna-NM_001184458.1_CENPK1137D cds-NP_076873.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1466623-1466751:+ gene-YBL108C-A_EthanolRed rna-NM_001184458.1_EthanolRed cds-NP_076873.1_EthanolRed 99.2 100.0 Mismatch 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005535.1:1861-1989:- gene-YBL108C-A_FaliES1 rna-NM_001184458.1_FaliES1 cds-NP_076873.1_FaliES1 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:7513-7641:- gene-YBL108C-A_1_MUCL30387 Unknown Unknown 100.0 100.0 Mismatch 2 2 1 Unknown Unknown Unknown Unknown Unknown
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:7762-7890:- gene-YBL108C-A_MUCL30387 rna-NM_001184458.1_MUCL30387 cds-NP_076873.1_MUCL30387 100.0 100.0 Mismatch 2 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:4963-5091:- gene-YBL108C-A_MUCL30388 rna-NM_001184458.1_MUCL30388 cds-NP_076873.1_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:7068-7196:- gene-YBL108C-A_MUCL39482 rna-NM_001184458.1_MUCL39482 cds-NP_076873.1_MUCL39482 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:9149-9277:- gene-YBL108C-A_MUCL42920 rna-NM_001184458.1_MUCL42920 cds-NP_076873.1_MUCL42920 100.0 100.0 Mismatch 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:7402-7530:- gene-YBL108C-A_NCIM3186 rna-NM_001184458.1_NCIM3186 cds-NP_076873.1_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000072.1:4061-4189:- gene-YBL108C-A_1_NCYC1407 Unknown Unknown 100.0 100.0 Mismatch 2 2 1 Unknown Unknown Unknown Unknown Unknown
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:9982-10110:- gene-YBL108C-A_NCYC1407 rna-NM_001184458.1_NCYC1407 cds-NP_076873.1_NCYC1407 100.0 100.0 Mismatch 2 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:8037-8165:- gene-YBL108C-A_PE2H3 rna-NM_001184458.1_PE2H3 cds-NP_076873.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:5669-5797:- gene-YBL108C-A_PE2H4 rna-NM_001184458.1_PE2H4 cds-NP_076873.1_PE2H4 100.0 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:7605-7733:- gene-YBL108C-A_S288C rna-NM_001184458.1_S288C cds-NP_076873.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000134.1:5723-5851:+ gene-YBL108C-A_SA1 rna-NM_001184458.1_SA1 cds-NP_076873.1_SA1 100.0 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:8730-8858:- gene-YBL108C-A_ThermosaccDry rna-NM_001184458.1_ThermosaccDry cds-NP_076873.1_ThermosaccDry 100.0 100.0 Mismatch 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:1039624-1039752:+ gene-YBL108C-A_VR1 rna-NM_001184458.1_VR1 cds-NP_076873.1_VR1 100.0 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000013.1:194298-194426:+ gene-YBL108C-A_ZTW1 rna-NM_001184458.1_ZTW1 cds-NP_076873.1_ZTW1 96.1 100.0 Mismatch 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:119695-119823:- gene-YBL108C-A_Sparadoxus rna-NM_001184458.1_Sparadoxus cds-NP_076873.1_Sparadoxus 96.1 100.0 Mismatch 1 1 1 True True False False False

Additional files