Gene name: PAU6
Reference locus (S288C): YNR076W
Gene biotype: protein_coding
Description: Seripauperin-18; Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme; identical to Pau18p; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU4 (0.988); PAU24 (0.988); PAU20 (0.988); PAU12 (0.988); PAU14 (0.988); PAU1 (0.988); PAU11 (0.988); PAU10 (0.988); PAU13 (0.988); PAU18 (0.988); PAU8 (0.988); PAU2 (0.975); PAU3 (0.975); PAU16 (0.975); PAU19 (0.969); PAU15 (0.969); PAU5 (0.969); PAU23 (0.915); PAU7 (0.901); PAU17 (0.895)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:432965-433327:+ | gene-YNR076W_AKU4011 | rna-NM_001183253.3_AKU4011 | cds-NP_014474.3_AKU4011 | 61.1 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000043.1:748-1110:- | gene-YNR076W_BG1 | rna-NM_001183253.3_BG1 | cds-NP_014474.3_BG1 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:11297-11676:- | gene-YNR076W_Bruggeman | rna-NM_001183253.3_Bruggeman | cds-NP_014474.3_Bruggeman | 83.4 | 96.4 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:423329-423691:+ | gene-YNR076W_CAT1 | rna-NM_001183253.3_CAT1 | cds-NP_014474.3_CAT1 | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:265174-265536:+ | gene-YNR076W_CBS1585 | rna-NM_001183253.3_CBS1585 | cds-NP_014474.3_CBS1585 | 92.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:1-289:- | gene-YNR076W_CBS436 | rna-NM_001183253.3_CBS436 | cds-NP_014474.3_CBS436 | 78.2 | 79.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:5687-6049:- | gene-YNR076W_CBS6413 | rna-NM_001183253.3_CBS6413 | cds-NP_014474.3_CBS6413 | 67.7 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1477667-1478029:+ | gene-YNR076W_MUCL30387 | rna-NM_001183253.3_MUCL30387 | cds-NP_014474.3_MUCL30387 | 95.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:6875-7237:- | gene-YNR076W_MUCL30388 | rna-NM_001183253.3_MUCL30388 | cds-NP_014474.3_MUCL30388 | 55.3 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:263096-263458:+ | gene-YNR076W_MUCL39482 | rna-NM_001183253.3_MUCL39482 | cds-NP_014474.3_MUCL39482 | 92.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000056.1:6717-7079:+ | gene-YNR076W_MUCL42920 | rna-NM_001183253.3_MUCL42920 | cds-NP_014474.3_MUCL42920 | 92.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:13057-13419:- | gene-YNR076W_NCIM3186 | rna-NM_001183253.3_NCIM3186 | cds-NP_014474.3_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:287-649:- | gene-YNR076W_NCYC1407 | rna-NM_001183253.3_NCYC1407 | cds-NP_014474.3_NCYC1407 | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:1040452-1040814:+ | gene-YNR076W_PE2H3 | rna-NM_001183253.3_PE2H3 | cds-NP_014474.3_PE2H3 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:1040196-1040558:+ | gene-YNR076W_PE2H4 | rna-NM_001183253.3_PE2H4 | cds-NP_014474.3_PE2H4 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:781918-782280:+ | gene-YNR076W_S288C | rna-NM_001183253.3_S288C | cds-NP_014474.3_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000160.1:1969-2331:+ | gene-YNR076W_SA1 | rna-NM_001183253.3_SA1 | cds-NP_014474.3_SA1 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:1-263:- | gene-YNR076W_ThermosaccDry | rna-NM_001183253.3_ThermosaccDry | cds-NP_014474.3_ThermosaccDry | 71.3 | 72.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:10942-11304:- | gene-YNR076W_VR1 | rna-NM_001183253.3_VR1 | cds-NP_014474.3_VR1 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:1013466-1013828:+ | gene-YNR076W_Sparadoxus | rna-NM_001183253.3_Sparadoxus | cds-NP_014474.3_Sparadoxus | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |