Gene name: PAU24
Reference locus (S288C): YBR301W
Gene biotype: protein_coding
Description: Seripauperin-24; Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU3 (0.988); PAU11 (0.988); PAU10 (0.988); PAU13 (0.988); PAU2 (0.988); PAU5 (0.988); PAU16 (0.988); PAU18 (0.988); PAU6 (0.988); PAU8 (0.988); PAU4 (0.988); PAU12 (0.988); PAU14 (0.988); PAU1 (0.988); PAU15 (0.975); PAU19 (0.975); PAU20 (0.975); TIR4 (0.924); PAU23 (0.906); PAU7 (0.905)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:1044208-1044570:+ | gene-YBR301W_AKU4011 | rna-NM_001178649.3_AKU4011 | cds-NP_009860.3_AKU4011 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000004.1:5246-5608:+ | gene-YBR301W_BG1 | rna-NM_001178649.3_BG1 | cds-NP_009860.3_BG1 | 94.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:796019-796381:+ | gene-YBR301W_Bruggeman | rna-NM_001178649.3_Bruggeman | cds-NP_009860.3_Bruggeman | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:798890-799252:+ | gene-YBR301W_CAT1 | rna-NM_001178649.3_CAT1 | cds-NP_009860.3_CAT1 | 98.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:1051279-1051609:+ | gene-YBR301W_CBS1585 | rna-NM_001178649.3_CBS1585 | cds-NP_009860.3_CBS1585 | 90.0 | 91.1 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:1039747-1040109:+ | gene-YBR301W_CBS6412 | rna-NM_001178649.3_CBS6412 | cds-NP_009860.3_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:788999-789361:+ | gene-YBR301W_CBS6413 | rna-NM_001178649.3_CBS6413 | cds-NP_009860.3_CBS6413 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:802957-803319:+ | gene-YBR301W_CENPK1137D | rna-NM_001178649.3_CENPK1137D | cds-NP_009860.3_CENPK1137D | 68.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:926225-926587:+ | gene-YBR301W_EthanolRed | rna-NM_001178649.3_EthanolRed | cds-NP_009860.3_EthanolRed | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:810862-811224:+ | gene-YBR301W_FaliES1 | rna-NM_001178649.3_FaliES1 | cds-NP_009860.3_FaliES1 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:798753-799115:+ | gene-YBR301W_MUCL30387 | rna-NM_001178649.3_MUCL30387 | cds-NP_009860.3_MUCL30387 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:816373-816735:+ | gene-YBR301W_MUCL30388 | rna-NM_001178649.3_MUCL30388 | cds-NP_009860.3_MUCL30388 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:9784-10146:- | gene-YBR301W_MUCL39482 | rna-NM_001178649.3_MUCL39482 | cds-NP_009860.3_MUCL39482 | 96.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:793349-793711:+ | gene-YBR301W_MUCL42920 | rna-NM_001178649.3_MUCL42920 | cds-NP_009860.3_MUCL42920 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:808854-809216:+ | gene-YBR301W_NCIM3186 | rna-NM_001178649.3_NCIM3186 | cds-NP_009860.3_NCIM3186 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:783290-783652:+ | gene-YBR301W_NCYC1407 | rna-NM_001178649.3_NCYC1407 | cds-NP_009860.3_NCYC1407 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:301095-301457:+ | gene-YBR301W_PE2H3 | rna-NM_001178649.3_PE2H3 | cds-NP_009860.3_PE2H3 | 94.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:422661-423023:+ | gene-YBR301W_PE2H4 | rna-NM_001178649.3_PE2H4 | cds-NP_009860.3_PE2H4 | 93.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:809057-809419:+ | gene-YBR301W_S288C | rna-NM_001178649.3_S288C | cds-NP_009860.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000206.1:1065-1312:- | gene-YBR301W_SA1 | rna-NM_001178649.3_SA1 | cds-NP_009860.3_SA1 | 68.0 | 68.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:809359-809721:+ | gene-YBR301W_ThermosaccDry | rna-NM_001178649.3_ThermosaccDry | cds-NP_009860.3_ThermosaccDry | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:789437-789799:+ | gene-YBR301W_VR1 | rna-NM_001178649.3_VR1 | cds-NP_009860.3_VR1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:781715-782077:+ | gene-YBR301W_ZTW1 | rna-NM_001178649.3_ZTW1 | cds-NP_009860.3_ZTW1 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:1104667-1105029:+ | gene-YBR301W_Sparadoxus | rna-NM_001178649.3_Sparadoxus | cds-NP_009860.3_Sparadoxus | 93.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |