Gene name: PAU23
Reference locus (S288C): YLR037C
Gene biotype: protein_coding
Description: Seripauperin-23; Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU3 (0.928); PAU1 (0.927); PAU17 (0.925); PAU14 (0.922); PAU19 (0.922); PAU12 (0.921); PAU5 (0.915); PAU6 (0.915); PAU4 (0.909); PAU24 (0.906); PAU18 (0.902); PAU15 (0.902); TIR4 (0.898); PAU7 (0.892); PAU10 (0.883); PAU11 (0.861); PAU16 (0.861); PAU8 (0.86); PAU13 (0.858); PAU2 (0.833)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:205174-205548:- | gene-YLR037C_AKU4011 | rna-NM_001181924.1_AKU4011 | cds-NP_013138.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:168318-168692:- | gene-YLR037C_BG1 | rna-NM_001181924.1_BG1 | cds-NP_013138.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:215081-215455:- | gene-YLR037C_Bruggeman | rna-NM_001181924.1_Bruggeman | cds-NP_013138.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:215407-215781:- | gene-YLR037C_CAT1 | rna-NM_001181924.1_CAT1 | cds-NP_013138.1_CAT1 | 98.1 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:212311-212685:- | gene-YLR037C_CBS1585 | rna-NM_001181924.1_CBS1585 | cds-NP_013138.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:202945-203319:- | gene-YLR037C_CBS436 | rna-NM_001181924.1_CBS436 | cds-NP_013138.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:210721-211095:- | gene-YLR037C_CBS6412 | rna-NM_001181924.1_CBS6412 | cds-NP_013138.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:212572-212946:- | gene-YLR037C_CBS6413 | rna-NM_001181924.1_CBS6413 | cds-NP_013138.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:201980-202354:- | gene-YLR037C_CENPK1137D | rna-NM_001181924.1_CENPK1137D | cds-NP_013138.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:204697-205071:- | gene-YLR037C_EthanolRed | rna-NM_001181924.1_EthanolRed | cds-NP_013138.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:204583-204957:- | gene-YLR037C_FaliES1 | rna-NM_001181924.1_FaliES1 | cds-NP_013138.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000289.1:10615-10775:+ | gene-YLR037C_JAY291 | rna-NM_001181924.1_JAY291 | cds-NP_013138.1_JAY291 | 42.9 | 42.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:212434-212808:- | gene-YLR037C_MUCL30387 | rna-NM_001181924.1_MUCL30387 | cds-NP_013138.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:219686-220060:- | gene-YLR037C_MUCL30388 | rna-NM_001181924.1_MUCL30388 | cds-NP_013138.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:212806-213180:- | gene-YLR037C_MUCL39482 | rna-NM_001181924.1_MUCL39482 | cds-NP_013138.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:212712-213086:- | gene-YLR037C_MUCL42920 | rna-NM_001181924.1_MUCL42920 | cds-NP_013138.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:222659-223033:- | gene-YLR037C_NCIM3186 | rna-NM_001181924.1_NCIM3186 | cds-NP_013138.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:204865-205239:- | gene-YLR037C_NCYC1407 | rna-NM_001181924.1_NCYC1407 | cds-NP_013138.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:210739-211113:- | gene-YLR037C_PE2H3 | rna-NM_001181924.1_PE2H3 | cds-NP_013138.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:210480-210854:- | gene-YLR037C_PE2H4 | rna-NM_001181924.1_PE2H4 | cds-NP_013138.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:222685-223059:- | gene-YLR037C_S288C | rna-NM_001181924.1_S288C | cds-NP_013138.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:48585-48959:- | gene-YLR037C_SA1 | rna-NM_001181924.1_SA1 | cds-NP_013138.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:204771-205145:- | gene-YLR037C_ThermosaccDry | rna-NM_001181924.1_ThermosaccDry | cds-NP_013138.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:218188-218562:- | gene-YLR037C_VR1 | rna-NM_001181924.1_VR1 | cds-NP_013138.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:204118-204492:- | gene-YLR037C_ZTW1 | rna-NM_001181924.1_ZTW1 | cds-NP_013138.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |