PAU22 (YPL282C)

Gene profile

Gene name: PAU22
Reference locus (S288C): YPL282C
Gene biotype: protein_coding

Description: Seripauperin-21; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons

Top 10 interactors (score): PAU21 (0.872); YOR392W (0.867); FEX1 (0.816); YOR365C (0.813); YOR389W (0.765); PAU16 (0.73); ERR1 (0.716); AMF1 (0.713); ERR2 (0.677); TIR4 (0.613); HSP33 (0.596); PHR1 (0.571); YLR156W (0.553); PAU3 (0.487); MAL13 (0.483); SOR2 (0.48); PAU13 (0.473); PAU11 (0.473); OPY1 (0.451); FLO10 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000129.1:1118-1612:+ gene-YPL282C_BG1 rna-NM_001184096.1_BG1 cds-NP_015041.1_BG1 98.9 100.0 Mismatch 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:1082529-1083023:+ gene-YPL282C_CENPK1137D rna-NM_001184096.1_CENPK1137D cds-NP_015041.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:1177-1671:- gene-YPL282C_MUCL30387 rna-NM_001184096.1_MUCL30387 cds-NP_015041.1_MUCL30387 72.5 100.0 Mismatch 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:7916-8410:- gene-YPL282C_NCIM3186 rna-NM_001184096.1_NCIM3186 cds-NP_015041.1_NCIM3186 67.4 100.0 Mismatch 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:7933-8427:- gene-YPL282C_S288C rna-NM_001184096.1_S288C cds-NP_015041.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000184.1:1323-1686:+ gene-YPL282C_SA1 rna-NM_001184096.1_SA1 cds-NP_015041.1_SA1 72.3 73.5 Mismatch 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:6070-6552:- gene-YPL282C_Sparadoxus rna-NM_001184096.1_Sparadoxus cds-NP_015041.1_Sparadoxus 84.1 96.7 Unannotated 1 1 0 False False False False True

Additional files