Gene name: PAU22
Reference locus (S288C): YPL282C
Gene biotype: protein_coding
Description: Seripauperin-21; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons
Top 10 interactors (score): PAU21 (0.872); YOR392W (0.867); FEX1 (0.816); YOR365C (0.813); YOR389W (0.765); PAU16 (0.73); ERR1 (0.716); AMF1 (0.713); ERR2 (0.677); TIR4 (0.613); HSP33 (0.596); PHR1 (0.571); YLR156W (0.553); PAU3 (0.487); MAL13 (0.483); SOR2 (0.48); PAU13 (0.473); PAU11 (0.473); OPY1 (0.451); FLO10 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000129.1:1118-1612:+ | gene-YPL282C_BG1 | rna-NM_001184096.1_BG1 | cds-NP_015041.1_BG1 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:1082529-1083023:+ | gene-YPL282C_CENPK1137D | rna-NM_001184096.1_CENPK1137D | cds-NP_015041.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:1177-1671:- | gene-YPL282C_MUCL30387 | rna-NM_001184096.1_MUCL30387 | cds-NP_015041.1_MUCL30387 | 72.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:7916-8410:- | gene-YPL282C_NCIM3186 | rna-NM_001184096.1_NCIM3186 | cds-NP_015041.1_NCIM3186 | 67.4 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:7933-8427:- | gene-YPL282C_S288C | rna-NM_001184096.1_S288C | cds-NP_015041.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000184.1:1323-1686:+ | gene-YPL282C_SA1 | rna-NM_001184096.1_SA1 | cds-NP_015041.1_SA1 | 72.3 | 73.5 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:6070-6552:- | gene-YPL282C_Sparadoxus | rna-NM_001184096.1_Sparadoxus | cds-NP_015041.1_Sparadoxus | 84.1 | 96.7 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |