Gene name: PAU20
Reference locus (S288C): YOL161C
Gene biotype: protein_coding
Description: Seripauperin-20; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; expression induced by low temperature and also by anaerobic conditions; induced during alcoholic fermentation
Top 10 interactors (score): PAU11 (0.988); PAU1 (0.988); PAU6 (0.988); PAU14 (0.975); PAU18 (0.975); PAU12 (0.975); PAU24 (0.975); PAU2 (0.975); PAU4 (0.975); PAU13 (0.969); PAU8 (0.969); PAU10 (0.969); PAU3 (0.929); PAU16 (0.928); PAU5 (0.928); PAU19 (0.928); PAU15 (0.921); PAU17 (0.848); YIL154C (0.813); PAU23 (0.77)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:1001216-1001578:+ | gene-YOL161C_AKU4011 | rna-NM_001183414.1_AKU4011 | cds-NP_014481.1_AKU4011 | 95.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000128.1:2973-3159:+ | gene-YOL161C_BG1 | rna-NM_001183414.1_BG1 | cds-NP_014481.1_BG1 | 50.6 | 51.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:4048-4410:- | gene-YOL161C_Bruggeman | rna-NM_001183414.1_Bruggeman | cds-NP_014481.1_Bruggeman | 74.3 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:820308-820669:+ | gene-YOL161C_CAT1 | rna-NM_001183414.1_CAT1 | cds-NP_014481.1_CAT1 | 80.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:785-1147:- | gene-YOL161C_CBS1585 | rna-NM_001183414.1_CBS1585 | cds-NP_014481.1_CBS1585 | 91.4 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:1324-1686:- | gene-YOL161C_CBS436 | rna-NM_001183414.1_CBS436 | cds-NP_014481.1_CBS436 | 96.4 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:1-154:- | gene-YOL161C_CBS6412 | rna-NM_001183414.1_CBS6412 | cds-NP_014481.1_CBS6412 | 41.3 | 42.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:424194-424556:+ | gene-YOL161C_CBS6413 | rna-NM_001183414.1_CBS6413 | cds-NP_014481.1_CBS6413 | 60.6 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:11448-11810:- | gene-YOL161C_CENPK1137D | rna-NM_001183414.1_CENPK1137D | cds-NP_014481.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000153.1:470-693:+ | gene-YOL161C_MUCL30387 | rna-NM_001183414.1_MUCL30387 | cds-NP_014481.1_MUCL30387 | 60.0 | 61.7 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:309-671:- | gene-YOL161C_MUCL30388 | rna-NM_001183414.1_MUCL30388 | cds-NP_014481.1_MUCL30388 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | MBVN01000006.1:1-325:+ | gene-YOL161C_MUCL39482 | rna-NM_001183414.1_MUCL39482 | cds-NP_014481.1_MUCL39482 | 86.5 | 89.5 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1392040-1392392:+ | gene-YOL161C_MUCL42920 | rna-NM_001183414.1_MUCL42920 | cds-NP_014481.1_MUCL42920 | 82.1 | 93.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:11438-11800:- | gene-YOL161C_NCIM3186 | rna-NM_001183414.1_NCIM3186 | cds-NP_014481.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:263945-264307:+ | gene-YOL161C_NCYC1407 | rna-NM_001183414.1_NCYC1407 | cds-NP_014481.1_NCYC1407 | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:203519-203881:+ | gene-YOL161C_PE2H3 | rna-NM_001183414.1_PE2H3 | cds-NP_014481.1_PE2H3 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:9541-9903:- | gene-YOL161C_PE2H4 | rna-NM_001183414.1_PE2H4 | cds-NP_014481.1_PE2H4 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:11549-11911:- | gene-YOL161C_S288C | rna-NM_001183414.1_S288C | cds-NP_014481.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000226.1:501-863:+ | gene-YOL161C_SA1 | rna-NM_001183414.1_SA1 | cds-NP_014481.1_SA1 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:274479-274841:+ | gene-YOL161C_VR1 | rna-NM_001183414.1_VR1 | cds-NP_014481.1_VR1 | 96.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:7009-7371:- | gene-YOL161C_Sparadoxus | rna-NM_001183414.1_Sparadoxus | cds-NP_014481.1_Sparadoxus | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |