PAU2 (YEL049W)


Gene profile

Gene name: PAU2
Reference locus (S288C): YEL049W
Gene biotype: protein_coding

Description: Seripauperin-2; Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme

Top 10 interactors (score): PAU11 (0.988); PAU4 (0.988); PAU3 (0.988); PAU16 (0.988); PAU13 (0.988); PAU24 (0.988); PAU14 (0.988); PAU12 (0.988); PAU6 (0.975); PAU15 (0.975); PAU10 (0.975); PAU1 (0.975); PAU20 (0.975); PAU5 (0.969); PAU18 (0.941); PAU19 (0.941); PAU8 (0.925); PAU17 (0.915); PAU7 (0.864); PAU23 (0.833)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:57794-58156:+ gene-YEL049W_AKU4011 rna-NM_001178864.1_AKU4011 cds-NP_010865.1_AKU4011 99.4 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000075.1:22373-22735:- gene-YEL049W_BG1 rna-NM_001178864.1_BG1 cds-NP_010865.1_BG1 99.7 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:61311-61673:+ gene-YEL049W_Bruggeman rna-NM_001178864.1_Bruggeman cds-NP_010865.1_Bruggeman 99.4 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:57741-58103:+ gene-YEL049W_CBS1585 rna-NM_001178864.1_CBS1585 cds-NP_010865.1_CBS1585 99.1 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:59369-59731:+ gene-YEL049W_CBS436 rna-NM_001178864.1_CBS436 cds-NP_010865.1_CBS436 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:57991-58353:+ gene-YEL049W_CBS6412 rna-NM_001178864.1_CBS6412 cds-NP_010865.1_CBS6412 99.4 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:62635-62997:+ gene-YEL049W_CBS6413 rna-NM_001178864.1_CBS6413 cds-NP_010865.1_CBS6413 99.4 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:61584-61946:+ gene-YEL049W_CENPK1137D rna-NM_001178864.1_CENPK1137D cds-NP_010865.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:57547-57909:+ gene-YEL049W_EthanolRed rna-NM_001178864.1_EthanolRed cds-NP_010865.1_EthanolRed 99.4 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:57810-58172:+ gene-YEL049W_FaliES1 rna-NM_001178864.1_FaliES1 cds-NP_010865.1_FaliES1 99.4 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000427.1:1-233:- gene-YEL049W_JAY291 rna-NM_001178864.1_JAY291 cds-NP_010865.1_JAY291 63.4 63.9 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:61995-62357:+ gene-YEL049W_MUCL30387 rna-NM_001178864.1_MUCL30387 cds-NP_010865.1_MUCL30387 99.4 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:57856-58218:+ gene-YEL049W_MUCL30388 rna-NM_001178864.1_MUCL30388 cds-NP_010865.1_MUCL30388 99.4 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:57108-57470:+ gene-YEL049W_MUCL39482 rna-NM_001178864.1_MUCL39482 cds-NP_010865.1_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:61742-62104:+ gene-YEL049W_MUCL42920 rna-NM_001178864.1_MUCL42920 cds-NP_010865.1_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:63727-64089:+ gene-YEL049W_NCIM3186 rna-NM_001178864.1_NCIM3186 cds-NP_010865.1_NCIM3186 98.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:62202-62564:+ gene-YEL049W_NCYC1407 rna-NM_001178864.1_NCYC1407 cds-NP_010865.1_NCYC1407 99.4 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:66223-66585:+ gene-YEL049W_PE2H3 rna-NM_001178864.1_PE2H3 cds-NP_010865.1_PE2H3 98.6 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:62138-62500:+ gene-YEL049W_PE2H4 rna-NM_001178864.1_PE2H4 cds-NP_010865.1_PE2H4 99.7 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:63728-64090:+ gene-YEL049W_S288C rna-NM_001178864.1_S288C cds-NP_010865.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000053.1:22533-22895:- gene-YEL049W_SA1 rna-NM_001178864.1_SA1 cds-NP_010865.1_SA1 96.9 100.0 Mismatch 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:58210-58572:+ gene-YEL049W_ThermosaccDry rna-NM_001178864.1_ThermosaccDry cds-NP_010865.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:57426-57788:+ gene-YEL049W_VR1 rna-NM_001178864.1_VR1 cds-NP_010865.1_VR1 98.6 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:57145-57507:+ gene-YEL049W_ZTW1 rna-NM_001178864.1_ZTW1 cds-NP_010865.1_ZTW1 99.4 100.0 Verified 1 1 1 True True False False False

Additional files