Gene name: PAU19
Reference locus (S288C): YMR325W
Gene biotype: protein_coding
Description: Seripauperin-19; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU16 (0.988); PAU15 (0.988); PAU3 (0.988); PAU13 (0.975); PAU8 (0.975); PAU1 (0.975); PAU14 (0.975); PAU12 (0.975); PAU11 (0.975); PAU24 (0.975); PAU6 (0.969); PAU18 (0.969); PAU10 (0.969); PAU5 (0.969); PAU4 (0.969); PAU2 (0.941); PAU20 (0.928); PAU17 (0.923); PAU7 (0.923); PAU23 (0.922)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:1069326-1069700:+ | gene-YMR325W_AKU4011 | rna-NM_001182838.1_AKU4011 | cds-NP_014058.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000307.1:1954-2310:- | gene-YMR325W_Bruggeman | rna-NM_001182838.1_Bruggeman | cds-NP_014058.1_Bruggeman | 94.1 | 95.2 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:894923-895297:+ | gene-YMR325W_CBS1585 | rna-NM_001182838.1_CBS1585 | cds-NP_014058.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:1474-1848:- | gene-YMR325W_CBS6412 | rna-NM_001182838.1_CBS6412 | cds-NP_014058.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:1059010-1059384:+ | gene-YMR325W_CBS6413 | rna-NM_001182838.1_CBS6413 | cds-NP_014058.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:917104-917478:+ | gene-YMR325W_CENPK1137D | rna-NM_001182838.1_CENPK1137D | cds-NP_014058.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:1049942-1050316:+ | gene-YMR325W_EthanolRed | rna-NM_001182838.1_EthanolRed | cds-NP_014058.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:900898-901272:+ | gene-YMR325W_FaliES1 | rna-NM_001182838.1_FaliES1 | cds-NP_014058.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000103.1:711-1046:- | gene-YMR325W_JAY291 | rna-NM_001182838.1_JAY291 | cds-NP_014058.1_JAY291 | 88.2 | 89.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000380.1:1922-2293:- | gene-YMR325W_MUCL30387 | rna-NM_001182838.1_MUCL30387 | cds-NP_014058.1_MUCL30387 | 98.1 | 99.2 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:896594-896968:+ | gene-YMR325W_MUCL39482 | rna-NM_001182838.1_MUCL39482 | cds-NP_014058.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:1068231-1068605:+ | gene-YMR325W_MUCL42920 | rna-NM_001182838.1_MUCL42920 | cds-NP_014058.1_MUCL42920 | 77.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:922595-922969:+ | gene-YMR325W_NCIM3186 | rna-NM_001182838.1_NCIM3186 | cds-NP_014058.1_NCIM3186 | 91.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:895940-896314:+ | gene-YMR325W_NCYC1407 | rna-NM_001182838.1_NCYC1407 | cds-NP_014058.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:922641-923015:+ | gene-YMR325W_S288C | rna-NM_001182838.1_S288C | cds-NP_014058.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:897304-897678:+ | gene-YMR325W_ThermosaccDry | rna-NM_001182838.1_ThermosaccDry | cds-NP_014058.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:801237-801611:+ | gene-YMR325W_VR1 | rna-NM_001182838.1_VR1 | cds-NP_014058.1_VR1 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:311487-311861:+ | gene-YMR325W_ZTW1 | rna-NM_001182838.1_ZTW1 | cds-NP_014058.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:34082-34456:- | gene-YMR325W_Sparadoxus | rna-NM_001182838.1_Sparadoxus | cds-NP_014058.1_Sparadoxus | 89.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |