Gene name: PAU18
Reference locus (S288C): YLL064C
Gene biotype: protein_coding
Description: Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau6p; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU4 (0.988); PAU24 (0.988); PAU13 (0.988); PAU11 (0.988); PAU8 (0.988); PAU14 (0.988); PAU1 (0.988); PAU12 (0.988); PAU6 (0.988); PAU10 (0.988); PAU16 (0.975); PAU20 (0.975); PAU3 (0.969); PAU19 (0.969); PAU2 (0.941); PAU5 (0.929); PAU15 (0.924); PAU23 (0.902); PAU17 (0.838); PAU7 (0.769)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:1-264:- | gene-YLL064C_AKU4011 | rna-NM_001181884.1_AKU4011 | cds-NP_013036.1_AKU4011 | 70.7 | 72.7 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000037.1:1157-1519:+ | gene-YLL064C_BG1 | rna-NM_001181884.1_BG1 | cds-NP_013036.1_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000313.1:1-326:+ | gene-YLL064C_Bruggeman | rna-NM_001181884.1_Bruggeman | cds-NP_013036.1_Bruggeman | 88.1 | 89.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:10312-10674:- | gene-YLL064C_CAT1 | rna-NM_001181884.1_CAT1 | cds-NP_013036.1_CAT1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:1036796-1037158:+ | gene-YLL064C_CBS1585 | rna-NM_001181884.1_CBS1585 | cds-NP_013036.1_CBS1585 | 97.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:1-257:- | gene-YLL064C_CBS436 | rna-NM_001181884.1_CBS436 | cds-NP_013036.1_CBS436 | 69.4 | 70.7 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:1039240-1039582:+ | gene-YLL064C_CBS6413 | rna-NM_001181884.1_CBS6413 | cds-NP_013036.1_CBS6413 | 89.2 | 94.4 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:5099-5467:- | gene-YLL064C_CENPK1137D | rna-NM_001181884.1_CENPK1137D | cds-NP_013036.1_CENPK1137D | 95.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:5818-6180:- | gene-YLL064C_MUCL30387 | rna-NM_001181884.1_MUCL30387 | cds-NP_013036.1_MUCL30387 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1458867-1459229:+ | gene-YLL064C_MUCL30388 | rna-NM_001181884.1_MUCL30388 | cds-NP_013036.1_MUCL30388 | 55.3 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:6912-7274:- | gene-YLL064C_MUCL39482 | rna-NM_001181884.1_MUCL39482 | cds-NP_013036.1_MUCL39482 | 69.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:11747-12109:- | gene-YLL064C_MUCL42920 | rna-NM_001181884.1_MUCL42920 | cds-NP_013036.1_MUCL42920 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:781887-782249:+ | gene-YLL064C_NCIM3186 | rna-NM_001181884.1_NCIM3186 | cds-NP_013036.1_NCIM3186 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:6922-7284:- | gene-YLL064C_NCYC1407 | rna-NM_001181884.1_NCYC1407 | cds-NP_013036.1_NCYC1407 | 97.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:7787-8149:- | gene-YLL064C_PE2H3 | rna-NM_001181884.1_PE2H3 | cds-NP_013036.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:1749-2111:- | gene-YLL064C_PE2H4 | rna-NM_001181884.1_PE2H4 | cds-NP_013036.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:13083-13445:- | gene-YLL064C_S288C | rna-NM_001181884.1_S288C | cds-NP_013036.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:6552-6914:- | gene-YLL064C_SA1 | rna-NM_001181884.1_SA1 | cds-NP_013036.1_SA1 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:1-292:- | gene-YLL064C_ThermosaccDry | rna-NM_001181884.1_ThermosaccDry | cds-NP_013036.1_ThermosaccDry | 77.9 | 80.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1490030-1490392:+ | gene-YLL064C_VR1 | rna-NM_001181884.1_VR1 | cds-NP_013036.1_VR1 | 98.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:20566-20928:- | gene-YLL064C_Sparadoxus | rna-NM_001181884.1_Sparadoxus | cds-NP_013036.1_Sparadoxus | 96.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |