Gene name: PAU17
Reference locus (S288C): YLL025W
Gene biotype: protein_coding
Description: Seripauperin-17; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; YLL025W is not an essential gene; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU3 (0.928); PAU23 (0.925); PAU14 (0.923); PAU19 (0.923); PAU12 (0.923); PAU1 (0.923); PAU5 (0.92); PAU2 (0.915); PAU15 (0.914); PAU16 (0.91); PAU24 (0.899); PAU6 (0.895); PAU4 (0.895); PAU7 (0.878); PAU20 (0.848); PAU18 (0.838); PAU13 (0.813); PAU11 (0.787); PAU10 (0.781); SPO19 (0.745)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:81910-82284:+ | gene-YLL025W_AKU4011 | rna-NM_001181845.1_AKU4011 | cds-NP_013075.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:45856-46230:+ | gene-YLL025W_BG1 | rna-NM_001181845.1_BG1 | cds-NP_013075.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:92162-92536:+ | gene-YLL025W_Bruggeman | rna-NM_001181845.1_Bruggeman | cds-NP_013075.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:92779-93153:+ | gene-YLL025W_CAT1 | rna-NM_001181845.1_CAT1 | cds-NP_013075.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:89608-89982:+ | gene-YLL025W_CBS1585 | rna-NM_001181845.1_CBS1585 | cds-NP_013075.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:79806-80180:+ | gene-YLL025W_CBS436 | rna-NM_001181845.1_CBS436 | cds-NP_013075.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:89525-89899:+ | gene-YLL025W_CBS6412 | rna-NM_001181845.1_CBS6412 | cds-NP_013075.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:89617-89991:+ | gene-YLL025W_CBS6413 | rna-NM_001181845.1_CBS6413 | cds-NP_013075.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:79752-80126:+ | gene-YLL025W_CENPK1137D | rna-NM_001181845.1_CENPK1137D | cds-NP_013075.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:82304-82678:+ | gene-YLL025W_EthanolRed | rna-NM_001181845.1_EthanolRed | cds-NP_013075.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:81618-81992:+ | gene-YLL025W_FaliES1 | rna-NM_001181845.1_FaliES1 | cds-NP_013075.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000062.1:1-132:- | gene-YLL025W_JAY291 | rna-NM_001181845.1_JAY291 | cds-NP_013075.1_JAY291 | 35.2 | 35.2 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:89575-89949:+ | gene-YLL025W_MUCL30387 | rna-NM_001181845.1_MUCL30387 | cds-NP_013075.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:94303-94677:+ | gene-YLL025W_MUCL30388 | rna-NM_001181845.1_MUCL30388 | cds-NP_013075.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:89817-90191:+ | gene-YLL025W_MUCL39482 | rna-NM_001181845.1_MUCL39482 | cds-NP_013075.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:89912-90286:+ | gene-YLL025W_MUCL42920 | rna-NM_001181845.1_MUCL42920 | cds-NP_013075.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:94721-95095:+ | gene-YLL025W_NCIM3186 | rna-NM_001181845.1_NCIM3186 | cds-NP_013075.1_NCIM3186 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:81683-82057:+ | gene-YLL025W_NCYC1407 | rna-NM_001181845.1_NCYC1407 | cds-NP_013075.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:88367-88741:+ | gene-YLL025W_PE2H3 | rna-NM_001181845.1_PE2H3 | cds-NP_013075.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:88177-88551:+ | gene-YLL025W_PE2H4 | rna-NM_001181845.1_PE2H4 | cds-NP_013075.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:94747-95121:+ | gene-YLL025W_S288C | rna-NM_001181845.1_S288C | cds-NP_013075.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000047.1:88331-88705:+ | gene-YLL025W_SA1 | rna-NM_001181845.1_SA1 | cds-NP_013075.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:82124-82498:+ | gene-YLL025W_ThermosaccDry | rna-NM_001181845.1_ThermosaccDry | cds-NP_013075.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:143900-144274:+ | gene-YLL025W_VR1 | rna-NM_001181845.1_VR1 | cds-NP_013075.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:81693-82067:+ | gene-YLL025W_ZTW1 | rna-NM_001181845.1_ZTW1 | cds-NP_013075.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:90199-90573:+ | gene-YLL025W_Sparadoxus | rna-NM_001181845.1_Sparadoxus | cds-NP_013075.1_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |