Gene name: PAU16
Reference locus (S288C): YKL224C
Gene biotype: protein_coding
Description: Seripauperin-16; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU2 (0.988); PAU3 (0.988); PAU4 (0.988); PAU24 (0.988); PAU19 (0.988); PAU15 (0.988); PAU6 (0.975); PAU18 (0.975); PAU14 (0.975); PAU8 (0.975); PAU1 (0.975); PAU11 (0.975); PAU13 (0.975); PAU12 (0.975); PAU5 (0.969); PAU10 (0.969); PAU20 (0.928); PAU17 (0.91); YKL223W (0.872); PAU7 (0.868)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:163-525:- | gene-YKL224C_MUCL30388 | rna-NM_001179789.1_MUCL30388 | cds-NP_012698.1_MUCL30388 | 87.9 | 97.5 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:1799-2170:- | gene-YKL224C_NCIM3186 | rna-NM_001179789.1_NCIM3186 | cds-NP_012698.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:1810-2181:- | gene-YKL224C_S288C | rna-NM_001179789.1_S288C | cds-NP_012698.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000224.1:40-411:+ | gene-YKL224C_VR1 | rna-NM_001179789.1_VR1 | cds-NP_012698.1_VR1 | 92.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:4609-4983:- | gene-YKL224C_Sparadoxus | rna-NM_001179789.1_Sparadoxus | cds-NP_012698.1_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |