Gene name: PAU14
Reference locus (S288C): YIL176C
Gene biotype: protein_coding
Description: Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau1p; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU4 (0.988); PAU8 (0.988); PAU18 (0.988); PAU6 (0.988); PAU11 (0.988); PAU13 (0.988); PAU12 (0.988); PAU10 (0.988); PAU2 (0.988); PAU1 (0.988); PAU24 (0.988); PAU20 (0.975); PAU19 (0.975); PAU16 (0.975); PAU3 (0.975); PAU15 (0.975); PAU5 (0.969); PAU17 (0.923); PAU23 (0.922); PAU7 (0.907)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:6198-6560:- | gene-YIL176C_AKU4011 | rna-NM_001179521.1_AKU4011 | cds-NP_012093.1_AKU4011 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1495548-1495910:+ | gene-YIL176C_Bruggeman | rna-NM_001179521.1_Bruggeman | cds-NP_012093.1_Bruggeman | 55.6 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:264412-264725:+ | gene-YIL176C_CAT1 | rna-NM_001179521.1_CAT1 | cds-NP_012093.1_CAT1 | 84.8 | 86.5 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:1-282:- | gene-YIL176C_CBS1585 | rna-NM_001179521.1_CBS1585 | cds-NP_012093.1_CBS1585 | 75.7 | 77.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:6312-6674:- | gene-YIL176C_CBS436 | rna-NM_001179521.1_CBS436 | cds-NP_012093.1_CBS436 | 52.3 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:1-341:- | gene-YIL176C_CBS6413 | rna-NM_001179521.1_CBS6413 | cds-NP_012093.1_CBS6413 | 92.0 | 93.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:1902-2264:- | gene-YIL176C_EthanolRed | rna-NM_001179521.1_EthanolRed | cds-NP_012093.1_EthanolRed | 54.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:1980-2342:- | gene-YIL176C_FaliES1 | rna-NM_001179521.1_FaliES1 | cds-NP_012093.1_FaliES1 | 71.0 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:9397-9759:- | gene-YIL176C_MUCL30387 | rna-NM_001179521.1_MUCL30387 | cds-NP_012093.1_MUCL30387 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:815488-815850:+ | gene-YIL176C_MUCL30388 | rna-NM_001179521.1_MUCL30388 | cds-NP_012093.1_MUCL30388 | 84.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:433243-433605:+ | gene-YIL176C_MUCL39482 | rna-NM_001179521.1_MUCL39482 | cds-NP_012093.1_MUCL39482 | 81.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000004.1:424-740:+ | gene-YIL176C_MUCL42920 | rna-NM_001179521.1_MUCL42920 | cds-NP_012093.1_MUCL42920 | 85.9 | 87.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:8793-9155:- | gene-YIL176C_NCIM3186 | rna-NM_001179521.1_NCIM3186 | cds-NP_012093.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | MBVM01000093.1:1-241:- | gene-YIL176C_NCYC1407 | rna-NM_001179521.1_NCYC1407 | cds-NP_012093.1_NCYC1407 | 65.2 | 66.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:327288-327650:+ | gene-YIL176C_PE2H3 | rna-NM_001179521.1_PE2H3 | cds-NP_012093.1_PE2H3 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:203221-203583:+ | gene-YIL176C_PE2H4 | rna-NM_001179521.1_PE2H4 | cds-NP_012093.1_PE2H4 | 97.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:8793-9155:- | gene-YIL176C_S288C | rna-NM_001179521.1_S288C | cds-NP_012093.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000136.1:2236-2598:- | gene-YIL176C_SA1 | rna-NM_001179521.1_SA1 | cds-NP_012093.1_SA1 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:1032868-1033264:+ | gene-YIL176C_ThermosaccDry | rna-NM_001179521.1_ThermosaccDry | cds-NP_012093.1_ThermosaccDry | 80.5 | 98.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1-282:- | gene-YIL176C_VR1 | rna-NM_001179521.1_VR1 | cds-NP_012093.1_VR1 | 75.7 | 77.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:11756-12118:- | gene-YIL176C_Sparadoxus | rna-NM_001179521.1_Sparadoxus | cds-NP_012093.1_Sparadoxus | 96.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |