Gene name: PAU13
Reference locus (S288C): YHL046C
Gene biotype: protein_coding
Description: Seripauperin-13; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU12 (0.988); PAU11 (0.988); PAU18 (0.988); PAU2 (0.988); PAU4 (0.988); PAU6 (0.988); PAU14 (0.988); PAU1 (0.988); PAU8 (0.988); PAU10 (0.988); PAU24 (0.988); PAU15 (0.975); PAU19 (0.975); PAU3 (0.975); PAU16 (0.975); PAU20 (0.969); PAU5 (0.941); YHL042W (0.872); PAU23 (0.858); YKL223W (0.832)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:6773-7135:- | gene-YHL046C_AKU4011 | rna-NM_001179126.1_AKU4011 | cds-NP_011817.1_AKU4011 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:780072-780421:+ | gene-YHL046C_Bruggeman | rna-NM_001179126.1_Bruggeman | cds-NP_011817.1_Bruggeman | 90.0 | 96.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:509-871:- | gene-YHL046C_CAT1 | rna-NM_001179126.1_CAT1 | cds-NP_011817.1_CAT1 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:6051-6413:- | gene-YHL046C_CBS1585 | rna-NM_001179126.1_CBS1585 | cds-NP_011817.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:7326-7688:- | gene-YHL046C_CBS6412 | rna-NM_001179126.1_CBS6412 | cds-NP_011817.1_CBS6412 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:6792-7154:- | gene-YHL046C_CBS6413 | rna-NM_001179126.1_CBS6413 | cds-NP_011817.1_CBS6413 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:7007-7369:- | gene-YHL046C_EthanolRed | rna-NM_001179126.1_EthanolRed | cds-NP_011817.1_EthanolRed | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:7322-7684:- | gene-YHL046C_FaliES1 | rna-NM_001179126.1_FaliES1 | cds-NP_011817.1_FaliES1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:768161-768523:+ | gene-YHL046C_MUCL30387 | rna-NM_001179126.1_MUCL30387 | cds-NP_011817.1_MUCL30387 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000033.1:253-615:+ | gene-YHL046C_MUCL30388 | rna-NM_001179126.1_MUCL30388 | cds-NP_011817.1_MUCL30388 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:1039066-1039428:+ | gene-YHL046C_MUCL39482 | rna-NM_001179126.1_MUCL39482 | cds-NP_011817.1_MUCL39482 | 96.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:9705-10067:- | gene-YHL046C_MUCL42920 | rna-NM_001179126.1_MUCL42920 | cds-NP_011817.1_MUCL42920 | 90.0 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:11805-12167:- | gene-YHL046C_NCIM3186 | rna-NM_001179126.1_NCIM3186 | cds-NP_011817.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:5890-6252:- | gene-YHL046C_NCYC1407 | rna-NM_001179126.1_NCYC1407 | cds-NP_011817.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:7969-8331:- | gene-YHL046C_PE2H3 | rna-NM_001179126.1_PE2H3 | cds-NP_011817.1_PE2H3 | 97.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:300643-301005:+ | gene-YHL046C_PE2H4 | rna-NM_001179126.1_PE2H4 | cds-NP_011817.1_PE2H4 | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:11923-12285:- | gene-YHL046C_S288C | rna-NM_001179126.1_S288C | cds-NP_011817.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:8442-8804:- | gene-YHL046C_ThermosaccDry | rna-NM_001179126.1_ThermosaccDry | cds-NP_011817.1_ThermosaccDry | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:6989-7351:- | gene-YHL046C_Sparadoxus | rna-NM_001179126.1_Sparadoxus | cds-NP_011817.1_Sparadoxus | 94.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |