Gene name: PAU12
Reference locus (S288C): YGR294W
Gene biotype: protein_coding
Description: Seripauperin-12; Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to both the endoplasmic reticulum and vacuole
Top 10 interactors (score): PAU8 (0.988); PAU6 (0.988); PAU18 (0.988); PAU13 (0.988); PAU24 (0.988); PAU10 (0.988); PAU11 (0.988); PAU14 (0.988); PAU4 (0.988); PAU1 (0.988); PAU2 (0.988); PAU15 (0.975); PAU19 (0.975); PAU16 (0.975); PAU5 (0.975); PAU3 (0.975); PAU20 (0.975); PAU17 (0.923); PAU23 (0.921); PAU7 (0.868)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000071.1:1861-2223:- | gene-YGR294W_BG1 | rna-NM_001181423.1_BG1 | cds-NP_011810.1_BG1 | 95.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:10510-10828:- | gene-YGR294W_Bruggeman | rna-NM_001181423.1_Bruggeman | cds-NP_011810.1_Bruggeman | 77.9 | 87.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000327.1:49-411:+ | gene-YGR294W_CAT1 | rna-NM_001181423.1_CAT1 | cds-NP_011810.1_CAT1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:7377-7739:- | gene-YGR294W_CBS1585 | rna-NM_001181423.1_CBS1585 | cds-NP_011810.1_CBS1585 | 96.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:795327-795689:+ | gene-YGR294W_CBS436 | rna-NM_001181423.1_CBS436 | cds-NP_011810.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:266921-267261:+ | gene-YGR294W_CBS6413 | rna-NM_001181423.1_CBS6413 | cds-NP_011810.1_CBS6413 | 87.8 | 93.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000353.1:421-678:- | gene-YGR294W_MUCL30387 | rna-NM_001181423.1_MUCL30387 | cds-NP_011810.1_MUCL30387 | 68.3 | 71.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:781380-781727:+ | gene-YGR294W_MUCL39482 | rna-NM_001181423.1_MUCL39482 | cds-NP_011810.1_MUCL39482 | 90.9 | 95.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1392257-1392614:+ | gene-YGR294W_MUCL42920 | rna-NM_001181423.1_MUCL42920 | cds-NP_011810.1_MUCL42920 | 84.1 | 96.1 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:1080306-1080668:+ | gene-YGR294W_NCIM3186 | rna-NM_001181423.1_NCIM3186 | cds-NP_011810.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:766370-766732:+ | gene-YGR294W_PE2H3 | rna-NM_001181423.1_PE2H3 | cds-NP_011810.1_PE2H3 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:767758-768120:+ | gene-YGR294W_PE2H4 | rna-NM_001181423.1_PE2H4 | cds-NP_011810.1_PE2H4 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:1080306-1080668:+ | gene-YGR294W_S288C | rna-NM_001181423.1_S288C | cds-NP_011810.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000086.1:2104-2466:- | gene-YGR294W_SA1 | rna-NM_001181423.1_SA1 | cds-NP_011810.1_SA1 | 95.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:13178-13510:- | gene-YGR294W_VR1 | rna-NM_001181423.1_VR1 | cds-NP_011810.1_VR1 | 77.2 | 88.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:820553-820915:+ | gene-YGR294W_Sparadoxus | rna-NM_001181423.1_Sparadoxus | cds-NP_011810.1_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |