Gene name: PAU11
Reference locus (S288C): YGL261C
Gene biotype: protein_coding
Description: Seripauperin-11; Putative protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; mRNA expression appears to be regulated by SUT1 and UPC2; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU14 (0.988); PAU10 (0.988); PAU13 (0.988); PAU12 (0.988); PAU18 (0.988); PAU6 (0.988); PAU8 (0.988); PAU4 (0.988); PAU1 (0.988); PAU24 (0.988); PAU20 (0.988); PAU2 (0.988); PAU19 (0.975); PAU16 (0.975); PAU5 (0.975); PAU3 (0.975); PAU15 (0.928); PAU23 (0.861); PAU7 (0.798); PAU17 (0.787)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:8974-9335:- | gene-YGL261C_AKU4011 | rna-NM_001181127.1_AKU4011 | cds-NP_011253.1_AKU4011 | 74.1 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:13460-13821:- | gene-YGL261C_Bruggeman | rna-NM_001181127.1_Bruggeman | cds-NP_011253.1_Bruggeman | 93.1 | 99.7 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000169.1:2-172:+ | gene-YGL261C_CAT1 | rna-NM_001181127.1_CAT1 | cds-NP_011253.1_CAT1 | 47.1 | 47.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1457789-1458149:+ | gene-YGL261C_CBS1585 | rna-NM_001181127.1_CBS1585 | cds-NP_011253.1_CBS1585 | 82.6 | 99.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | MBVR01000049.1:28709-29071:- | gene-YGL261C_CBS436 | rna-NM_001181127.1_CBS436 | cds-NP_011253.1_CBS436 | 97.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:7059-7421:- | gene-YGL261C_CBS6413 | rna-NM_001181127.1_CBS6413 | cds-NP_011253.1_CBS6413 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:6122-6484:- | gene-YGL261C_CENPK1137D | rna-NM_001181127.1_CENPK1137D | cds-NP_011253.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:7-369:- | gene-YGL261C_EthanolRed | rna-NM_001181127.1_EthanolRed | cds-NP_011253.1_EthanolRed | 98.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:9256-9612:- | gene-YGL261C_MUCL30387 | rna-NM_001181127.1_MUCL30387 | cds-NP_011253.1_MUCL30387 | 93.1 | 98.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:10487-10849:- | gene-YGL261C_MUCL30388 | rna-NM_001181127.1_MUCL30388 | cds-NP_011253.1_MUCL30388 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:1042156-1042518:+ | gene-YGL261C_MUCL39482 | rna-NM_001181127.1_MUCL39482 | cds-NP_011253.1_MUCL39482 | 69.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:6290-6652:- | gene-YGL261C_NCIM3186 | rna-NM_001181127.1_NCIM3186 | cds-NP_011253.1_NCIM3186 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:1736-2098:- | gene-YGL261C_NCYC1407 | rna-NM_001181127.1_NCYC1407 | cds-NP_011253.1_NCYC1407 | 66.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:6705-7067:- | gene-YGL261C_PE2H3 | rna-NM_001181127.1_PE2H3 | cds-NP_011253.1_PE2H3 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:6502-6864:- | gene-YGL261C_PE2H4 | rna-NM_001181127.1_PE2H4 | cds-NP_011253.1_PE2H4 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:6290-6652:- | gene-YGL261C_S288C | rna-NM_001181127.1_S288C | cds-NP_011253.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000047.1:6337-6699:- | gene-YGL261C_SA1 | rna-NM_001181127.1_SA1 | cds-NP_011253.1_SA1 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000145.1:5952-6170:- | gene-YGL261C_VR1 | rna-NM_001181127.1_VR1 | cds-NP_011253.1_VR1 | 59.7 | 60.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |