Gene name: PAU10
Reference locus (S288C): YDR542W
Gene biotype: protein_coding
Description: Seripauperin-10; Protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole; member of the seripauperin multigene family encoded mainly in subtelomeric regions; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU13 (0.988); PAU24 (0.988); PAU11 (0.988); PAU8 (0.988); PAU18 (0.988); PAU6 (0.988); PAU14 (0.988); PAU12 (0.988); PAU4 (0.988); PAU1 (0.975); PAU2 (0.975); PAU20 (0.969); PAU16 (0.969); PAU3 (0.969); PAU19 (0.969); PAU5 (0.941); PAU15 (0.928); PAU23 (0.883); PAU7 (0.791); PAU17 (0.781)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:7854-8216:- | gene-YDR542W_AKU4011 | rna-NM_001180850.3_AKU4011 | cds-NP_010831.3_AKU4011 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:1-363:- | gene-YDR542W_BG1 | rna-NM_001180850.3_BG1 | cds-NP_010831.3_BG1 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:6-368:- | gene-YDR542W_Bruggeman | rna-NM_001180850.3_Bruggeman | cds-NP_010831.3_Bruggeman | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:7455-7817:- | gene-YDR542W_CAT1 | rna-NM_001180850.3_CAT1 | cds-NP_010831.3_CAT1 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000031.1:1139-1501:- | gene-YDR542W_CBS1585 | rna-NM_001180850.3_CBS1585 | cds-NP_010831.3_CBS1585 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1477176-1477538:+ | gene-YDR542W_CBS436 | rna-NM_001180850.3_CBS436 | cds-NP_010831.3_CBS436 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:8475-8837:- | gene-YDR542W_CBS6412 | rna-NM_001180850.3_CBS6412 | cds-NP_010831.3_CBS6412 | 61.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | MBVP01000087.1:281-643:+ | gene-YDR542W_CBS6413 | rna-NM_001180850.3_CBS6413 | cds-NP_010831.3_CBS6413 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1470142-1470592:+ | gene-YDR542W_FaliES1 | rna-NM_001180850.3_FaliES1 | cds-NP_010831.3_FaliES1 | 79.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:69-431:- | gene-YDR542W_MUCL30387 | rna-NM_001180850.3_MUCL30387 | cds-NP_010831.3_MUCL30387 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:6378-6740:- | gene-YDR542W_MUCL30388 | rna-NM_001180850.3_MUCL30388 | cds-NP_010831.3_MUCL30388 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:8571-8933:- | gene-YDR542W_MUCL39482 | rna-NM_001180850.3_MUCL39482 | cds-NP_010831.3_MUCL39482 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:6182-6544:- | gene-YDR542W_MUCL42920 | rna-NM_001180850.3_MUCL42920 | cds-NP_010831.3_MUCL42920 | 96.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1523172-1523534:+ | gene-YDR542W_NCIM3186 | rna-NM_001180850.3_NCIM3186 | cds-NP_010831.3_NCIM3186 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:1047821-1048183:+ | gene-YDR542W_NCYC1407 | rna-NM_001180850.3_NCYC1407 | cds-NP_010831.3_NCYC1407 | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1473442-1473804:+ | gene-YDR542W_PE2H3 | rna-NM_001180850.3_PE2H3 | cds-NP_010831.3_PE2H3 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1478910-1479272:+ | gene-YDR542W_PE2H4 | rna-NM_001180850.3_PE2H4 | cds-NP_010831.3_PE2H4 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1523249-1523611:+ | gene-YDR542W_S288C | rna-NM_001180850.3_S288C | cds-NP_010831.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000150.1:4-366:- | gene-YDR542W_SA1 | rna-NM_001180850.3_SA1 | cds-NP_010831.3_SA1 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1474449-1474843:+ | gene-YDR542W_ThermosaccDry | rna-NM_001180850.3_ThermosaccDry | cds-NP_010831.3_ThermosaccDry | 90.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:5-367:- | gene-YDR542W_VR1 | rna-NM_001180850.3_VR1 | cds-NP_010831.3_VR1 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:13-373:- | gene-YDR542W_ZTW1 | rna-NM_001180850.3_ZTW1 | cds-NP_010831.3_ZTW1 | 97.2 | 99.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:932826-933188:+ | gene-YDR542W_Sparadoxus | rna-NM_001180850.3_Sparadoxus | cds-NP_010831.3_Sparadoxus | 94.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |