Gene name: PAU1
Reference locus (S288C): YJL223C
Gene biotype: protein_coding
Description: Seripauperin-14; Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; active during alcoholic fermentation; regulated by anaerobiosis, negatively regulated by oxygen; repressed by heme; identical to Pau14p; Belongs to the SRP1/TIP1 family. Seripauperin subfamily
Top 10 interactors (score): PAU12 (0.988); PAU20 (0.988); PAU14 (0.988); PAU13 (0.988); PAU24 (0.988); PAU11 (0.988); PAU4 (0.988); PAU8 (0.988); PAU6 (0.988); PAU18 (0.988); PAU10 (0.975); PAU15 (0.975); PAU16 (0.975); PAU2 (0.975); PAU19 (0.975); PAU3 (0.969); PAU5 (0.969); PAU23 (0.927); PAU17 (0.923); PAU7 (0.912)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:263672-264034:+ | gene-YJL223C_AKU4011 | rna-NM_001181656.1_AKU4011 | cds-NP_012312.1_AKU4011 | 96.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000009.1:1996-2358:+ | gene-YJL223C_BG1 | rna-NM_001181656.1_BG1 | cds-NP_012312.1_BG1 | 97.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:778798-779122:+ | gene-YJL223C_Bruggeman | rna-NM_001181656.1_Bruggeman | cds-NP_012312.1_Bruggeman | 83.1 | 89.5 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:798465-798821:+ | gene-YJL223C_CAT1 | rna-NM_001181656.1_CAT1 | cds-NP_012312.1_CAT1 | 74.9 | 90.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000090.1:96-375:- | gene-YJL223C_CBS1585 | rna-NM_001181656.1_CBS1585 | cds-NP_012312.1_CBS1585 | 74.6 | 77.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:1038099-1038461:+ | gene-YJL223C_CBS6413 | rna-NM_001181656.1_CBS6413 | cds-NP_012312.1_CBS6413 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:392-754:- | gene-YJL223C_FaliES1 | rna-NM_001181656.1_FaliES1 | cds-NP_012312.1_FaliES1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:7921-8283:- | gene-YJL223C_MUCL30387 | rna-NM_001181656.1_MUCL30387 | cds-NP_012312.1_MUCL30387 | 85.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:1038567-1038929:+ | gene-YJL223C_MUCL39482 | rna-NM_001181656.1_MUCL39482 | cds-NP_012312.1_MUCL39482 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000243.1:404-668:- | gene-YJL223C_MUCL42920 | rna-NM_001181656.1_MUCL42920 | cds-NP_012312.1_MUCL42920 | 71.6 | 73.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:8755-9117:- | gene-YJL223C_NCIM3186 | rna-NM_001181656.1_NCIM3186 | cds-NP_012312.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:1-243:- | gene-YJL223C_NCYC1407 | rna-NM_001181656.1_NCYC1407 | cds-NP_012312.1_NCYC1407 | 66.3 | 66.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:2161-2523:- | gene-YJL223C_PE2H3 | rna-NM_001181656.1_PE2H3 | cds-NP_012312.1_PE2H3 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:4147-4509:- | gene-YJL223C_PE2H4 | rna-NM_001181656.1_PE2H4 | cds-NP_012312.1_PE2H4 | 97.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:8776-9138:- | gene-YJL223C_S288C | rna-NM_001181656.1_S288C | cds-NP_012312.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | MBWA01000048.1:457-819:- | gene-YJL223C_ThermosaccDry | rna-NM_001181656.1_ThermosaccDry | cds-NP_012312.1_ThermosaccDry | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:429198-429560:+ | gene-YJL223C_VR1 | rna-NM_001181656.1_VR1 | cds-NP_012312.1_VR1 | 95.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:771070-771432:+ | gene-YJL223C_Sparadoxus | rna-NM_001181656.1_Sparadoxus | cds-NP_012312.1_Sparadoxus | 96.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |