Gene name: PAM17
Reference locus (S288C): YKR065C
Gene biotype: protein_coding
Description: Presequence translocated-associated motor subunit PAM17, mitochondrial; Constituent of the TIM23 complex; proposed alternatively to be a component of the import motor (PAM complex) or to interact with and modulate the core TIM23 (Translocase of the Inner mitochondrial Membrane) complex; protein abundance increases in response to DNA replication stress; Belongs to the PAM17 family
Top 10 interactors (score): TIM17 (0.998); PAM16 (0.997); TIM50 (0.996); SSC1 (0.993); TIM44 (0.993); PAM18 (0.992); TIM21 (0.989); MGE1 (0.985); TIM23 (0.982); MGR2 (0.939); MDJ2 (0.926); MAS2 (0.908); MAS1 (0.907); TIM54 (0.879); ZIM17 (0.766); TOM70 (0.757); TOM40 (0.746); HSP60 (0.728); MDJ1 (0.712); TOM22 (0.712)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:551340-551933:- | gene-YKR065C_AKU4011 | rna-NM_001179855.3_AKU4011 | cds-NP_012991.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:92339-92932:+ | gene-YKR065C_BG1 | rna-NM_001179855.3_BG1 | cds-NP_012991.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:572769-573362:- | gene-YKR065C_Bruggeman | rna-NM_001179855.3_Bruggeman | cds-NP_012991.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:569193-569786:- | gene-YKR065C_CAT1 | rna-NM_001179855.3_CAT1 | cds-NP_012991.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:563831-564424:- | gene-YKR065C_CBS1585 | rna-NM_001179855.3_CBS1585 | cds-NP_012991.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:562166-562759:- | gene-YKR065C_CBS436 | rna-NM_001179855.3_CBS436 | cds-NP_012991.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:547121-547714:- | gene-YKR065C_CBS6412 | rna-NM_001179855.3_CBS6412 | cds-NP_012991.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:563651-564244:- | gene-YKR065C_CBS6413 | rna-NM_001179855.3_CBS6413 | cds-NP_012991.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:564954-565547:- | gene-YKR065C_CENPK1137D | rna-NM_001179855.3_CENPK1137D | cds-NP_012991.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:560649-561242:- | gene-YKR065C_EthanolRed | rna-NM_001179855.3_EthanolRed | cds-NP_012991.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:564549-565142:- | gene-YKR065C_FaliES1 | rna-NM_001179855.3_FaliES1 | cds-NP_012991.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000410.1:13089-13682:+ | gene-YKR065C_JAY291 | rna-NM_001179855.3_JAY291 | cds-NP_012991.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:573168-573761:- | gene-YKR065C_MUCL30387 | rna-NM_001179855.3_MUCL30387 | cds-NP_012991.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:567780-568373:- | gene-YKR065C_MUCL30388 | rna-NM_001179855.3_MUCL30388 | cds-NP_012991.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:562660-563253:- | gene-YKR065C_MUCL39482 | rna-NM_001179855.3_MUCL39482 | cds-NP_012991.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:568683-569276:- | gene-YKR065C_MUCL42920 | rna-NM_001179855.3_MUCL42920 | cds-NP_012991.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:565288-565881:- | gene-YKR065C_NCIM3186 | rna-NM_001179855.3_NCIM3186 | cds-NP_012991.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:563083-563676:- | gene-YKR065C_NCYC1407 | rna-NM_001179855.3_NCYC1407 | cds-NP_012991.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:588244-588837:- | gene-YKR065C_PE2H3 | rna-NM_001179855.3_PE2H3 | cds-NP_012991.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:572634-573227:- | gene-YKR065C_PE2H4 | rna-NM_001179855.3_PE2H4 | cds-NP_012991.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:565299-565892:- | gene-YKR065C_S288C | rna-NM_001179855.3_S288C | cds-NP_012991.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:115950-116543:+ | gene-YKR065C_SA1 | rna-NM_001179855.3_SA1 | cds-NP_012991.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:563788-564381:- | gene-YKR065C_ThermosaccDry | rna-NM_001179855.3_ThermosaccDry | cds-NP_012991.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:563556-564149:- | gene-YKR065C_VR1 | rna-NM_001179855.3_VR1 | cds-NP_012991.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:561276-561869:- | gene-YKR065C_ZTW1 | rna-NM_001179855.3_ZTW1 | cds-NP_012991.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:586677-587270:- | gene-YKR065C_Sparadoxus | rna-NM_001179855.3_Sparadoxus | cds-NP_012991.3_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |