Gene name: PAL2
Reference locus (S288C): YHR097C
Gene biotype: protein_coding
Description: Uncharacterized protein YHR097C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YHR097C has a paralog, PAL1, that arose from the whole genome duplication
Top 10 interactors (score): YPL247C (0.747); YLR257W (0.738); TMA10 (0.714); YOL014W (0.677); OM45 (0.665); SLA2 (0.664); YMR196W (0.637); TMC1 (0.636); YDR090C (0.619); YNL208W (0.609); RTC3 (0.607); YFR016C (0.595); IGD1 (0.575); LCL1 (0.571); DIA1 (0.569); FBP26 (0.565); YNL194C (0.56); XBP1 (0.555); HSP42 (0.547); MSC1 (0.536)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:284294-285518:- | gene-YHR097C_AKU4011 | rna-NM_001179227.1_AKU4011 | cds-NP_011965.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:232383-233607:+ | gene-YHR097C_BG1 | rna-NM_001179227.1_BG1 | cds-NP_011965.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:291589-292813:- | gene-YHR097C_Bruggeman | rna-NM_001179227.1_Bruggeman | cds-NP_011965.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:286741-287965:- | gene-YHR097C_CAT1 | rna-NM_001179227.1_CAT1 | cds-NP_011965.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:283324-284548:- | gene-YHR097C_CBS1585 | rna-NM_001179227.1_CBS1585 | cds-NP_011965.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:280687-281911:- | gene-YHR097C_CBS436 | rna-NM_001179227.1_CBS436 | cds-NP_011965.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:285155-286379:- | gene-YHR097C_CBS6412 | rna-NM_001179227.1_CBS6412 | cds-NP_011965.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:284348-285572:- | gene-YHR097C_CBS6413 | rna-NM_001179227.1_CBS6413 | cds-NP_011965.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:290558-291782:- | gene-YHR097C_CENPK1137D | rna-NM_001179227.1_CENPK1137D | cds-NP_011965.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:343209-344433:- | gene-YHR097C_EthanolRed | rna-NM_001179227.1_EthanolRed | cds-NP_011965.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:284697-285921:- | gene-YHR097C_FaliES1 | rna-NM_001179227.1_FaliES1 | cds-NP_011965.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000045.1:5282-6506:- | gene-YHR097C_JAY291 | rna-NM_001179227.1_JAY291 | cds-NP_011965.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:291066-292290:- | gene-YHR097C_MUCL30387 | rna-NM_001179227.1_MUCL30387 | cds-NP_011965.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:290971-292195:- | gene-YHR097C_MUCL30388 | rna-NM_001179227.1_MUCL30388 | cds-NP_011965.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:283661-284885:- | gene-YHR097C_MUCL39482 | rna-NM_001179227.1_MUCL39482 | cds-NP_011965.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:289916-291140:- | gene-YHR097C_MUCL42920 | rna-NM_001179227.1_MUCL42920 | cds-NP_011965.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:297267-298491:- | gene-YHR097C_NCIM3186 | rna-NM_001179227.1_NCIM3186 | cds-NP_011965.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:285870-287094:- | gene-YHR097C_NCYC1407 | rna-NM_001179227.1_NCYC1407 | cds-NP_011965.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:285316-286540:- | gene-YHR097C_PE2H3 | rna-NM_001179227.1_PE2H3 | cds-NP_011965.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:292743-293967:- | gene-YHR097C_PE2H4 | rna-NM_001179227.1_PE2H4 | cds-NP_011965.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:297385-298609:- | gene-YHR097C_S288C | rna-NM_001179227.1_S288C | cds-NP_011965.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:60367-61591:+ | gene-YHR097C_SA1 | rna-NM_001179227.1_SA1 | cds-NP_011965.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:285780-287004:- | gene-YHR097C_ThermosaccDry | rna-NM_001179227.1_ThermosaccDry | cds-NP_011965.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:293405-294629:- | gene-YHR097C_VR1 | rna-NM_001179227.1_VR1 | cds-NP_011965.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:276811-278035:- | gene-YHR097C_ZTW1 | rna-NM_001179227.1_ZTW1 | cds-NP_011965.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:282477-283703:- | gene-YHR097C_Sparadoxus | rna-NM_001179227.1_Sparadoxus | cds-NP_011965.1_Sparadoxus | 87.9 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |