Gene name: PAD1
Reference locus (S288C): YDR538W
Gene biotype: protein_coding
Description: Flavin prenyltransferase PAD1, mitochondrial; Phenylacrylic acid decarboxylase; confers resistance to cinnamic acid, decarboxylates aromatic carboxylic acids to the corresponding vinyl derivatives; also has mRNA binding activity; homolog of E. coli UbiX; co-overproduction of Pad1p and Fdc1p greatly increases cinnamic acid decarboxylase activity
Top 10 interactors (score): FDC1 (0.99); COQ2 (0.972); YDL086W (0.69); ATF1 (0.69); BAT2 (0.628); OPT2 (0.574); AIM2 (0.572); VPS70 (0.569); PSP1 (0.569); AQY2 (0.553); AQY1 (0.528); ARO10 (0.525); UBP15 (0.495); ECM30 (0.495); AAD6 (0.485); SEM1 (0.45); PRO2 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1450495-1451223:+ | gene-YDR538W_AKU4011 | rna-NM_001180846.3_AKU4011 | cds-NP_010827.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000117.1:2376-3104:- | gene-YDR538W_BG1 | rna-NM_001180846.3_BG1 | cds-NP_010827.3_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1483314-1484042:+ | gene-YDR538W_Bruggeman | rna-NM_001180846.3_Bruggeman | cds-NP_010827.3_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1459613-1460341:+ | gene-YDR538W_CAT1 | rna-NM_001180846.3_CAT1 | cds-NP_010827.3_CAT1 | 89.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1445223-1445951:+ | gene-YDR538W_CBS1585 | rna-NM_001180846.3_CBS1585 | cds-NP_010827.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1464878-1465606:+ | gene-YDR538W_CBS436 | rna-NM_001180846.3_CBS436 | cds-NP_010827.3_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1440387-1441115:+ | gene-YDR538W_CBS6412 | rna-NM_001180846.3_CBS6412 | cds-NP_010827.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1463883-1464611:+ | gene-YDR538W_CBS6413 | rna-NM_001180846.3_CBS6413 | cds-NP_010827.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1509180-1509908:+ | gene-YDR538W_CENPK1137D | rna-NM_001180846.3_CENPK1137D | cds-NP_010827.3_CENPK1137D | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1454033-1454761:+ | gene-YDR538W_EthanolRed | rna-NM_001180846.3_EthanolRed | cds-NP_010827.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1457787-1458515:+ | gene-YDR538W_FaliES1 | rna-NM_001180846.3_FaliES1 | cds-NP_010827.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000206.1:11555-12283:- | gene-YDR538W_JAY291 | rna-NM_001180846.3_JAY291 | cds-NP_010827.3_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1465396-1466124:+ | gene-YDR538W_MUCL30387 | rna-NM_001180846.3_MUCL30387 | cds-NP_010827.3_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1446633-1447361:+ | gene-YDR538W_MUCL30388 | rna-NM_001180846.3_MUCL30388 | cds-NP_010827.3_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1436720-1437448:+ | gene-YDR538W_MUCL39482 | rna-NM_001180846.3_MUCL39482 | cds-NP_010827.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1379769-1380497:+ | gene-YDR538W_MUCL42920 | rna-NM_001180846.3_MUCL42920 | cds-NP_010827.3_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1510825-1511553:+ | gene-YDR538W_NCIM3186 | rna-NM_001180846.3_NCIM3186 | cds-NP_010827.3_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1450222-1450950:+ | gene-YDR538W_NCYC1407 | rna-NM_001180846.3_NCYC1407 | cds-NP_010827.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1461158-1461886:+ | gene-YDR538W_PE2H3 | rna-NM_001180846.3_PE2H3 | cds-NP_010827.3_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1466626-1467354:+ | gene-YDR538W_PE2H4 | rna-NM_001180846.3_PE2H4 | cds-NP_010827.3_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1510902-1511630:+ | gene-YDR538W_S288C | rna-NM_001180846.3_S288C | cds-NP_010827.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:105686-106414:- | gene-YDR538W_SA1 | rna-NM_001180846.3_SA1 | cds-NP_010827.3_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1462093-1462821:+ | gene-YDR538W_ThermosaccDry | rna-NM_001180846.3_ThermosaccDry | cds-NP_010827.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1477545-1478522:+ | gene-YDR538W_VR1 | rna-NM_001180846.3_VR1 | cds-NP_010827.3_VR1 | 73.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:503870-504598:+ | gene-YDR538W_ZTW1 | rna-NM_001180846.3_ZTW1 | cds-NP_010827.3_ZTW1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1470399-1471127:+ | gene-YDR538W_Sparadoxus | rna-NM_001180846.3_Sparadoxus | cds-NP_010827.3_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |