Gene name: PAC10
Reference locus (S288C): YGR078C
Gene biotype: protein_coding
Description: Prefoldin subunit 3; Part of the heteromeric co-chaperone GimC/prefoldin complex; complex promotes efficient protein folding; Belongs to the prefoldin subunit alpha family
Top 10 interactors (score): GIM5 (0.999); GIM4 (0.999); GIM3 (0.999); YKE2 (0.999); PFD1 (0.992); ELC1 (0.915); SDD2 (0.907); SMX2 (0.896); PRE8 (0.892); RPT4 (0.875); PUP2 (0.873); TUB3 (0.87); PLP1 (0.865); TCP1 (0.843); NIP100 (0.795); CCT4 (0.791); RBL2 (0.791); SCL1 (0.78); CCT8 (0.771); TUB1 (0.76)
Homologues (species, bitscore): VBP1 (Homo sapiens, 126.7); Vbp1 (Mus musculus, 126.7); vbp1 (Danio rerio, 129.4); vbp1 (Xenopus tropicalis, 134.4); mgr (Drosophila melanogaster, 112.8); pfd-3 (Caenorhabditis elegans, 100.9); PFD3 (Arabidopsis thaliana, 115.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:623461-624060:- | gene-YGR078C_AKU4011 | rna-NM_001181207.3_AKU4011 | cds-NP_011592.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:59730-60329:- | gene-YGR078C_BG1 | rna-NM_001181207.3_BG1 | cds-NP_011592.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:625723-626322:- | gene-YGR078C_Bruggeman | rna-NM_001181207.3_Bruggeman | cds-NP_011592.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:624169-624768:- | gene-YGR078C_CAT1 | rna-NM_001181207.3_CAT1 | cds-NP_011592.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:624755-625354:- | gene-YGR078C_CBS1585 | rna-NM_001181207.3_CBS1585 | cds-NP_011592.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:626084-626683:- | gene-YGR078C_CBS436 | rna-NM_001181207.3_CBS436 | cds-NP_011592.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:617581-618180:- | gene-YGR078C_CBS6412 | rna-NM_001181207.3_CBS6412 | cds-NP_011592.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:621464-622063:- | gene-YGR078C_CBS6413 | rna-NM_001181207.3_CBS6413 | cds-NP_011592.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:639472-640071:- | gene-YGR078C_CENPK1137D | rna-NM_001181207.3_CENPK1137D | cds-NP_011592.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:611715-612314:- | gene-YGR078C_EthanolRed | rna-NM_001181207.3_EthanolRed | cds-NP_011592.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:615180-615779:- | gene-YGR078C_FaliES1 | rna-NM_001181207.3_FaliES1 | cds-NP_011592.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:66117-66716:- | gene-YGR078C_JAY291 | rna-NM_001181207.3_JAY291 | cds-NP_011592.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:622402-623001:- | gene-YGR078C_MUCL30387 | rna-NM_001181207.3_MUCL30387 | cds-NP_011592.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:625769-626368:- | gene-YGR078C_MUCL30388 | rna-NM_001181207.3_MUCL30388 | cds-NP_011592.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:620606-621205:- | gene-YGR078C_MUCL39482 | rna-NM_001181207.3_MUCL39482 | cds-NP_011592.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:630402-631001:- | gene-YGR078C_MUCL42920 | rna-NM_001181207.3_MUCL42920 | cds-NP_011592.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:639772-640371:- | gene-YGR078C_NCIM3186 | rna-NM_001181207.3_NCIM3186 | cds-NP_011592.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:614787-615386:- | gene-YGR078C_NCYC1407 | rna-NM_001181207.3_NCYC1407 | cds-NP_011592.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:618022-618621:- | gene-YGR078C_PE2H3 | rna-NM_001181207.3_PE2H3 | cds-NP_011592.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:623146-623745:- | gene-YGR078C_PE2H4 | rna-NM_001181207.3_PE2H4 | cds-NP_011592.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:639772-640371:- | gene-YGR078C_S288C | rna-NM_001181207.3_S288C | cds-NP_011592.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:66312-66911:- | gene-YGR078C_SA1 | rna-NM_001181207.3_SA1 | cds-NP_011592.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:634506-635105:- | gene-YGR078C_ThermosaccDry | rna-NM_001181207.3_ThermosaccDry | cds-NP_011592.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:731468-732067:- | gene-YGR078C_VR1 | rna-NM_001181207.3_VR1 | cds-NP_011592.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:89978-90577:- | gene-YGR078C_ZTW1 | rna-NM_001181207.3_ZTW1 | cds-NP_011592.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:625074-625673:- | gene-YGR078C_Sparadoxus | rna-NM_001181207.3_Sparadoxus | cds-NP_011592.3_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |