OXR1 (YPL196W)


Gene profile

Gene name: OXR1
Reference locus (S288C): YPL196W
Gene biotype: protein_coding

Description: Oxidation resistance protein 1; Protein of unknown function required for oxidative damage resistance; required for normal levels of resistance to oxidative damage; null mutants are sensitive to hydrogen peroxide; member of a conserved family of proteins found in eukaryotes; Belongs to the OXR1 family

Top 10 interactors (score): SVF1 (0.877); ZPR1 (0.854); UGA2 (0.814); XDJ1 (0.805); NCE103 (0.778); LHS1 (0.751); UBX3 (0.724); FMT1 (0.721); YBL055C (0.717); UBA4 (0.713); CPR4 (0.708); GEP3 (0.702); YPK9 (0.682); SOD2 (0.68); SCJ1 (0.653); RRD1 (0.639); MDL2 (0.62); CAM1 (0.61); TEF4 (0.61); PRS3 (0.58)

Homologues (species, bitscore): NCOA7 (Homo sapiens, 90.9); Ncoa7 (Mus musculus, 90.9); LOC559575 (Danio rerio, 89.7); ncoa7 (Xenopus tropicalis, 99.4); mtd (Drosophila melanogaster, 92.4); lmd-3 (Caenorhabditis elegans, 90.1); AT4G39870 (Arabidopsis thaliana, 70.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:152894-153715:+ gene-YPL196W_AKU4011 rna-NM_001184010.1_AKU4011 cds-NP_015128.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:358682-359503:+ gene-YPL196W_BG1 rna-NM_001184010.1_BG1 cds-NP_015128.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:178878-179699:+ gene-YPL196W_Bruggeman rna-NM_001184010.1_Bruggeman cds-NP_015128.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:175233-176054:+ gene-YPL196W_CAT1 rna-NM_001184010.1_CAT1 cds-NP_015128.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:157082-157903:+ gene-YPL196W_CBS1585 rna-NM_001184010.1_CBS1585 cds-NP_015128.1_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:171773-172594:+ gene-YPL196W_CBS436 rna-NM_001184010.1_CBS436 cds-NP_015128.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:161883-162704:+ gene-YPL196W_CBS6412 rna-NM_001184010.1_CBS6412 cds-NP_015128.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:153255-154076:+ gene-YPL196W_CBS6413 rna-NM_001184010.1_CBS6413 cds-NP_015128.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:174990-175811:+ gene-YPL196W_CENPK1137D rna-NM_001184010.1_CENPK1137D cds-NP_015128.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:152013-152834:+ gene-YPL196W_EthanolRed rna-NM_001184010.1_EthanolRed cds-NP_015128.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:159384-160205:+ gene-YPL196W_FaliES1 rna-NM_001184010.1_FaliES1 cds-NP_015128.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000267.1:411-1232:+ gene-YPL196W_JAY291 rna-NM_001184010.1_JAY291 cds-NP_015128.1_JAY291 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:170265-171086:+ gene-YPL196W_MUCL30387 rna-NM_001184010.1_MUCL30387 cds-NP_015128.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:168420-169241:+ gene-YPL196W_MUCL30388 rna-NM_001184010.1_MUCL30388 cds-NP_015128.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:150411-151232:+ gene-YPL196W_MUCL39482 rna-NM_001184010.1_MUCL39482 cds-NP_015128.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:207253-208074:+ gene-YPL196W_MUCL42920 rna-NM_001184010.1_MUCL42920 cds-NP_015128.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:175026-175847:+ gene-YPL196W_NCIM3186 rna-NM_001184010.1_NCIM3186 cds-NP_015128.1_NCIM3186 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:156779-157600:+ gene-YPL196W_NCYC1407 rna-NM_001184010.1_NCYC1407 cds-NP_015128.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:164394-165215:+ gene-YPL196W_PE2H3 rna-NM_001184010.1_PE2H3 cds-NP_015128.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:164037-164858:+ gene-YPL196W_PE2H4 rna-NM_001184010.1_PE2H4 cds-NP_015128.1_PE2H4 99.8 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:175043-175864:+ gene-YPL196W_S288C rna-NM_001184010.1_S288C cds-NP_015128.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:197486-198307:- gene-YPL196W_SA1 rna-NM_001184010.1_SA1 cds-NP_015128.1_SA1 99.8 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:159163-159984:+ gene-YPL196W_ThermosaccDry rna-NM_001184010.1_ThermosaccDry cds-NP_015128.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:174167-174988:+ gene-YPL196W_VR1 rna-NM_001184010.1_VR1 cds-NP_015128.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:158518-159339:+ gene-YPL196W_ZTW1 rna-NM_001184010.1_ZTW1 cds-NP_015128.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:160096-160893:+ gene-YPL196W_Sparadoxus rna-NM_001184010.1_Sparadoxus cds-NP_015128.1_Sparadoxus 89.9 97.0 Verified 1 1 1 False True False False False

Additional files