OST4 (YDL232W)


Gene profile

Gene name: OST4
Reference locus (S288C): YDL232W
Gene biotype: protein_coding

Description: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST4; Subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes protein asparagine-linked glycosylation; type I membrane protein required for incorporation of Ost3p or Ost6p into the OST complex

Top 10 interactors (score): OST1 (0.999); OST5 (0.999); WBP1 (0.999); OST6 (0.999); STT3 (0.999); OST2 (0.999); SWP1 (0.999); OST3 (0.999); SBH1 (0.999); SEC61 (0.957); SBH2 (0.943); DIE2 (0.904); CWH41 (0.901); CAX4 (0.9); SSS1 (0.754); DAD1 (0.557); GPI2 (0.525); SPC2 (0.499); NSG1 (0.498); PMP2 (0.497)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:21591-21701:+ gene-YDL232W_AKU4011 rna-NM_001180292.1_AKU4011 cds-NP_010049.1_AKU4011 100.0 100.0 Mismatch 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000077.1:44750-44860:- gene-YDL232W_BG1 rna-NM_001180292.1_BG1 cds-NP_010049.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:37310-37420:+ gene-YDL232W_Bruggeman rna-NM_001180292.1_Bruggeman cds-NP_010049.1_Bruggeman 100.0 100.0 Mismatch 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:40229-40339:+ gene-YDL232W_CAT1 rna-NM_001180292.1_CAT1 cds-NP_010049.1_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:20966-21076:+ gene-YDL232W_CBS1585 rna-NM_001180292.1_CBS1585 cds-NP_010049.1_CBS1585 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:37732-37842:+ gene-YDL232W_CBS436 rna-NM_001180292.1_CBS436 cds-NP_010049.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:21469-21579:+ gene-YDL232W_CBS6412 rna-NM_001180292.1_CBS6412 cds-NP_010049.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:38351-38461:+ gene-YDL232W_CBS6413 rna-NM_001180292.1_CBS6413 cds-NP_010049.1_CBS6413 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:37455-37565:+ gene-YDL232W_CENPK1137D rna-NM_001180292.1_CENPK1137D cds-NP_010049.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:35182-35292:+ gene-YDL232W_EthanolRed rna-NM_001180292.1_EthanolRed cds-NP_010049.1_EthanolRed 100.0 100.0 Mismatch 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:38484-38594:+ gene-YDL232W_FaliES1 rna-NM_001180292.1_FaliES1 cds-NP_010049.1_FaliES1 100.0 100.0 Mismatch 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000011.1:5929-6039:- gene-YDL232W_JAY291 rna-NM_001180292.1_JAY291 cds-NP_010049.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:36605-36715:+ gene-YDL232W_MUCL30387 rna-NM_001180292.1_MUCL30387 cds-NP_010049.1_MUCL30387 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:26172-26282:+ gene-YDL232W_MUCL30388 rna-NM_001180292.1_MUCL30388 cds-NP_010049.1_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:21560-21670:+ gene-YDL232W_MUCL39482 rna-NM_001180292.1_MUCL39482 cds-NP_010049.1_MUCL39482 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:37743-37853:+ gene-YDL232W_MUCL42920 rna-NM_001180292.1_MUCL42920 cds-NP_010049.1_MUCL42920 100.0 100.0 Mismatch 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:38410-38520:+ gene-YDL232W_NCIM3186 rna-NM_001180292.1_NCIM3186 cds-NP_010049.1_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:21516-21626:+ gene-YDL232W_NCYC1407 rna-NM_001180292.1_NCYC1407 cds-NP_010049.1_NCYC1407 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:28802-28912:+ gene-YDL232W_PE2H3 rna-NM_001180292.1_PE2H3 cds-NP_010049.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:28812-28922:+ gene-YDL232W_PE2H4 rna-NM_001180292.1_PE2H4 cds-NP_010049.1_PE2H4 100.0 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:38487-38597:+ gene-YDL232W_S288C rna-NM_001180292.1_S288C cds-NP_010049.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000107.1:5714-5824:- gene-YDL232W_SA1 rna-NM_001180292.1_SA1 cds-NP_010049.1_SA1 100.0 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:38612-38722:+ gene-YDL232W_ThermosaccDry rna-NM_001180292.1_ThermosaccDry cds-NP_010049.1_ThermosaccDry 100.0 100.0 Mismatch 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:38538-38648:+ gene-YDL232W_VR1 rna-NM_001180292.1_VR1 cds-NP_010049.1_VR1 100.0 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:37671-37781:+ gene-YDL232W_ZTW1 rna-NM_001180292.1_ZTW1 cds-NP_010049.1_ZTW1 100.0 100.0 Mismatch 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:40960-41070:+ gene-YDL232W_Sparadoxus rna-NM_001180292.1_Sparadoxus cds-NP_010049.1_Sparadoxus 93.6 100.0 Mismatch 1 1 1 False True False False False

Additional files