Gene name: OKP1
Reference locus (S288C): YGR179C
Gene biotype: protein_coding
Description: Central kinetochore subunit OKP1; Outer kinetochore protein required for accurate chromosome segregation; component of COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) a kinetochore sub-complex which functions as a platform for kinetochore assembly; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-Q and fission yeast fta7
Top 10 interactors (score): AME1 (0.999); MCM21 (0.999); CTF19 (0.999); NKP1 (0.997); CSE4 (0.997); CHL4 (0.996); MCM22 (0.995); CTF3 (0.994); MCM16 (0.994); IML3 (0.992); NKP2 (0.991); DSN1 (0.986); NNF1 (0.94); NSL1 (0.93); MTW1 (0.921); SPC24 (0.887); HHF1 (0.882); CNN1 (0.878); HTA1 (0.864); SPC25 (0.86)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:821428-822648:- | gene-YGR179C_AKU4011 | rna-NM_001181308.1_AKU4011 | cds-NP_011695.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:99539-100759:- | gene-YGR179C_BG1 | rna-NM_001181308.1_BG1 | cds-NP_011695.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:827356-828576:- | gene-YGR179C_Bruggeman | rna-NM_001181308.1_Bruggeman | cds-NP_011695.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:823452-824672:- | gene-YGR179C_CAT1 | rna-NM_001181308.1_CAT1 | cds-NP_011695.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:822143-823363:- | gene-YGR179C_CBS1585 | rna-NM_001181308.1_CBS1585 | cds-NP_011695.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:826033-827253:- | gene-YGR179C_CBS436 | rna-NM_001181308.1_CBS436 | cds-NP_011695.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:813513-814733:- | gene-YGR179C_CBS6412 | rna-NM_001181308.1_CBS6412 | cds-NP_011695.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:819009-820229:- | gene-YGR179C_CBS6413 | rna-NM_001181308.1_CBS6413 | cds-NP_011695.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:853399-854619:- | gene-YGR179C_CENPK1137D | rna-NM_001181308.1_CENPK1137D | cds-NP_011695.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:808019-809239:- | gene-YGR179C_EthanolRed | rna-NM_001181308.1_EthanolRed | cds-NP_011695.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:812410-813630:- | gene-YGR179C_FaliES1 | rna-NM_001181308.1_FaliES1 | cds-NP_011695.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000226.1:2512-3732:+ | gene-YGR179C_JAY291 | rna-NM_001181308.1_JAY291 | cds-NP_011695.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:824846-826066:- | gene-YGR179C_MUCL30387 | rna-NM_001181308.1_MUCL30387 | cds-NP_011695.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:824557-825777:- | gene-YGR179C_MUCL30388 | rna-NM_001181308.1_MUCL30388 | cds-NP_011695.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:817719-818939:- | gene-YGR179C_MUCL39482 | rna-NM_001181308.1_MUCL39482 | cds-NP_011695.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:834334-835554:- | gene-YGR179C_MUCL42920 | rna-NM_001181308.1_MUCL42920 | cds-NP_011695.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:853675-854895:- | gene-YGR179C_NCIM3186 | rna-NM_001181308.1_NCIM3186 | cds-NP_011695.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:812828-814048:- | gene-YGR179C_NCYC1407 | rna-NM_001181308.1_NCYC1407 | cds-NP_011695.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:832023-833243:- | gene-YGR179C_PE2H3 | rna-NM_001181308.1_PE2H3 | cds-NP_011695.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:837133-838353:- | gene-YGR179C_PE2H4 | rna-NM_001181308.1_PE2H4 | cds-NP_011695.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:853675-854895:- | gene-YGR179C_S288C | rna-NM_001181308.1_S288C | cds-NP_011695.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:77392-78612:- | gene-YGR179C_SA1 | rna-NM_001181308.1_SA1 | cds-NP_011695.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:832921-834141:- | gene-YGR179C_ThermosaccDry | rna-NM_001181308.1_ThermosaccDry | cds-NP_011695.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:937168-938388:- | gene-YGR179C_VR1 | rna-NM_001181308.1_VR1 | cds-NP_011695.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:134359-135579:- | gene-YGR179C_ZTW1 | rna-NM_001181308.1_ZTW1 | cds-NP_011695.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:824095-825315:- | gene-YGR179C_Sparadoxus | rna-NM_001181308.1_Sparadoxus | cds-NP_011695.1_Sparadoxus | 85.8 | 99.8 | Verified | 1 | 1 | 0 | False | False | False | True | False |