Gene name: OGG1
Reference locus (S288C): YML060W
Gene biotype: protein_coding
Description: Nuclear and mitochondrial glycosylase/lyase; specifically excises 7,8-dihydro-8-oxoguanine residues located opposite cytosine or thymine residues in DNA, repairs oxidative damage to mitochondrial DNA, contributes to UVA resistance; Belongs to the type-1 OGG1 family
Top 10 interactors (score): NTG2 (0.981); MSH6 (0.98); NTG1 (0.978); APN2 (0.978); UNG1 (0.975); RAD27 (0.975); RAD30 (0.974); APN1 (0.967); MSH3 (0.949); MSH2 (0.944); RAD10 (0.941); CDC9 (0.932); MLH1 (0.922); RAD52 (0.921); RAD14 (0.91); CTF13 (0.9); SKP1 (0.9); CBF2 (0.9); CEP3 (0.9); YKU70 (0.835)
Homologues (species, bitscore): OGG1 (Homo sapiens, 187.2); Ogg1 (Mus musculus, 196.8); ogg1 (Danio rerio, 177.2); ogg1 (Xenopus tropicalis, 188.7); Ogg1 (Drosophila melanogaster, 157.5); OGG1 (Arabidopsis thaliana, 149.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:145614-146744:+ | gene-YML060W_AKU4011 | rna-NM_001182419.1_AKU4011 | cds-NP_013651.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:329411-330541:- | gene-YML060W_BG1 | rna-NM_001182419.1_BG1 | cds-NP_013651.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:151747-152877:+ | gene-YML060W_Bruggeman | rna-NM_001182419.1_Bruggeman | cds-NP_013651.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:153414-154544:+ | gene-YML060W_CAT1 | rna-NM_001182419.1_CAT1 | cds-NP_013651.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:145623-146753:+ | gene-YML060W_CBS1585 | rna-NM_001182419.1_CBS1585 | cds-NP_013651.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:151508-152638:+ | gene-YML060W_CBS436 | rna-NM_001182419.1_CBS436 | cds-NP_013651.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:146331-147461:+ | gene-YML060W_CBS6412 | rna-NM_001182419.1_CBS6412 | cds-NP_013651.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:144806-145936:+ | gene-YML060W_CBS6413 | rna-NM_001182419.1_CBS6413 | cds-NP_013651.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:146597-147727:+ | gene-YML060W_CENPK1137D | rna-NM_001182419.1_CENPK1137D | cds-NP_013651.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:145887-147017:+ | gene-YML060W_EthanolRed | rna-NM_001182419.1_EthanolRed | cds-NP_013651.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:146394-147524:+ | gene-YML060W_FaliES1 | rna-NM_001182419.1_FaliES1 | cds-NP_013651.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000366.1:9600-10730:- | gene-YML060W_JAY291 | rna-NM_001182419.1_JAY291 | cds-NP_013651.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:150269-151399:+ | gene-YML060W_MUCL30387 | rna-NM_001182419.1_MUCL30387 | cds-NP_013651.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:153455-154585:+ | gene-YML060W_MUCL30388 | rna-NM_001182419.1_MUCL30388 | cds-NP_013651.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:145634-146764:+ | gene-YML060W_MUCL39482 | rna-NM_001182419.1_MUCL39482 | cds-NP_013651.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:151451-152581:+ | gene-YML060W_MUCL42920 | rna-NM_001182419.1_MUCL42920 | cds-NP_013651.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:151825-152955:+ | gene-YML060W_NCIM3186 | rna-NM_001182419.1_NCIM3186 | cds-NP_013651.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:146429-147559:+ | gene-YML060W_NCYC1407 | rna-NM_001182419.1_NCYC1407 | cds-NP_013651.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:151822-152952:+ | gene-YML060W_PE2H3 | rna-NM_001182419.1_PE2H3 | cds-NP_013651.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:151686-152816:+ | gene-YML060W_PE2H4 | rna-NM_001182419.1_PE2H4 | cds-NP_013651.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:151871-153001:+ | gene-YML060W_S288C | rna-NM_001182419.1_S288C | cds-NP_013651.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:31261-32391:- | gene-YML060W_SA1 | rna-NM_001182419.1_SA1 | cds-NP_013651.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:145686-146816:+ | gene-YML060W_ThermosaccDry | rna-NM_001182419.1_ThermosaccDry | cds-NP_013651.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:150034-151164:+ | gene-YML060W_VR1 | rna-NM_001182419.1_VR1 | cds-NP_013651.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:125223-126353:+ | gene-YML060W_ZTW1 | rna-NM_001182419.1_ZTW1 | cds-NP_013651.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:156817-157947:+ | gene-YML060W_Sparadoxus | rna-NM_001182419.1_Sparadoxus | cds-NP_013651.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |