Gene name: ODC2
Reference locus (S288C): YOR222W
Gene biotype: protein_coding
Description: Solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21; Mitochondrial inner membrane transporter; 2-oxodicarboxylate transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochondrial matrix to the cytosol for use in lysine and glutamate biosynthesis and in lysine catabolism; ODC2 has a paralog, ODC1, that arose from the whole genome duplication
Top 10 interactors (score): ODC1 (0.777); ACO1 (0.696); DCG1 (0.671); PEX11 (0.567); YHM2 (0.551); ACO2 (0.53); YMC1 (0.525); CPA1 (0.513); CPA2 (0.493); SAL1 (0.482); YMC2 (0.482); MRPL1 (0.471); LSC1 (0.464); ILV6 (0.454); VBA1 (0.451); RSM22 (0.45); HIS4 (0.446); ILV3 (0.419); LYS2 (0.401)
Homologues (species, bitscore): SLC25A21 (Homo sapiens, 193.0); Slc25a21 (Mus musculus, 186.4); slc25a21 (Danio rerio, 200.3); slc25a21 (Xenopus tropicalis, 195.3); CG5254 (Drosophila melanogaster, 215.3); R11.1 (Caenorhabditis elegans, 195.3); mSFC1 (Arabidopsis thaliana, 146.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:749115-750038:+ | gene-YOR222W_AKU4011 | rna-NM_001183641.1_AKU4011 | cds-NP_014865.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:151147-152070:+ | gene-YOR222W_BG1 | rna-NM_001183641.1_BG1 | cds-NP_014865.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:734574-735497:+ | gene-YOR222W_Bruggeman | rna-NM_001183641.1_Bruggeman | cds-NP_014865.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:735224-736147:+ | gene-YOR222W_CAT1 | rna-NM_001183641.1_CAT1 | cds-NP_014865.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:732102-733025:+ | gene-YOR222W_CBS1585 | rna-NM_001183641.1_CBS1585 | cds-NP_014865.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:730789-731712:+ | gene-YOR222W_CBS436 | rna-NM_001183641.1_CBS436 | cds-NP_014865.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:729221-730144:+ | gene-YOR222W_CBS6412 | rna-NM_001183641.1_CBS6412 | cds-NP_014865.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:737860-738783:+ | gene-YOR222W_CBS6413 | rna-NM_001183641.1_CBS6413 | cds-NP_014865.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:758096-759019:+ | gene-YOR222W_CENPK1137D | rna-NM_001183641.1_CENPK1137D | cds-NP_014865.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:725252-726175:+ | gene-YOR222W_EthanolRed | rna-NM_001183641.1_EthanolRed | cds-NP_014865.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:730649-731572:+ | gene-YOR222W_FaliES1 | rna-NM_001183641.1_FaliES1 | cds-NP_014865.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:95191-96114:- | gene-YOR222W_JAY291 | rna-NM_001183641.1_JAY291 | cds-NP_014865.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:737912-738835:+ | gene-YOR222W_MUCL30387 | rna-NM_001183641.1_MUCL30387 | cds-NP_014865.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:745330-746253:+ | gene-YOR222W_MUCL30388 | rna-NM_001183641.1_MUCL30388 | cds-NP_014865.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:739431-740354:+ | gene-YOR222W_MUCL39482 | rna-NM_001183641.1_MUCL39482 | cds-NP_014865.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:749012-749935:+ | gene-YOR222W_MUCL42920 | rna-NM_001183641.1_MUCL42920 | cds-NP_014865.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:758219-759142:+ | gene-YOR222W_NCIM3186 | rna-NM_001183641.1_NCIM3186 | cds-NP_014865.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:739533-740456:+ | gene-YOR222W_NCYC1407 | rna-NM_001183641.1_NCYC1407 | cds-NP_014865.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:738922-739845:+ | gene-YOR222W_PE2H3 | rna-NM_001183641.1_PE2H3 | cds-NP_014865.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:749299-750222:+ | gene-YOR222W_PE2H4 | rna-NM_001183641.1_PE2H4 | cds-NP_014865.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:758330-759253:+ | gene-YOR222W_S288C | rna-NM_001183641.1_S288C | cds-NP_014865.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:168329-169252:+ | gene-YOR222W_SA1 | rna-NM_001183641.1_SA1 | cds-NP_014865.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:729834-730757:+ | gene-YOR222W_ThermosaccDry | rna-NM_001183641.1_ThermosaccDry | cds-NP_014865.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:793363-794286:+ | gene-YOR222W_VR1 | rna-NM_001183641.1_VR1 | cds-NP_014865.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:462735-463658:+ | gene-YOR222W_ZTW1 | rna-NM_001183641.1_ZTW1 | cds-NP_014865.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:735700-736623:+ | gene-YOR222W_Sparadoxus | rna-NM_001183641.1_Sparadoxus | cds-NP_014865.1_Sparadoxus | 92.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |