Gene name: OCT1
Reference locus (S288C): YKL134C
Gene biotype: protein_coding
Description: Mitochondrial intermediate peptidase; cleaves destabilizing N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis
Top 10 interactors (score): ICP55 (0.984); CYM1 (0.938); RIP1 (0.88); YFH1 (0.863); MAS2 (0.86); MAS1 (0.82); IMO32 (0.806); PCP1 (0.778); ATP23 (0.774); AFG3 (0.773); OMA1 (0.768); TIM12 (0.766); TIM10 (0.766); SSC1 (0.762); COX18 (0.751); KEL3 (0.746); HOT13 (0.72); TIM9 (0.705); MCP2 (0.668); HCR1 (0.662)
Homologues (species, bitscore): MIPEP (Homo sapiens, 358.6); Mipep (Mus musculus, 356.3); im:6903007 (Danio rerio, 371.7); mipep (Xenopus tropicalis, 381.7); CG7791 (Drosophila melanogaster, 327.8); Y67H2A.7 (Caenorhabditis elegans, 233.0); AT5G51540 (Arabidopsis thaliana, 314.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:176020-178338:- | gene-YKL134C_AKU4011 | rna-NM_001179700.2_AKU4011 | cds-NP_012788.2_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:153184-155502:- | gene-YKL134C_BG1 | rna-NM_001179700.2_BG1 | cds-NP_012788.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:193682-196000:- | gene-YKL134C_Bruggeman | rna-NM_001179700.2_Bruggeman | cds-NP_012788.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:189005-191323:- | gene-YKL134C_CAT1 | rna-NM_001179700.2_CAT1 | cds-NP_012788.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:188272-190590:- | gene-YKL134C_CBS1585 | rna-NM_001179700.2_CBS1585 | cds-NP_012788.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:186862-189180:- | gene-YKL134C_CBS436 | rna-NM_001179700.2_CBS436 | cds-NP_012788.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:172894-175212:- | gene-YKL134C_CBS6412 | rna-NM_001179700.2_CBS6412 | cds-NP_012788.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:188717-191035:- | gene-YKL134C_CBS6413 | rna-NM_001179700.2_CBS6413 | cds-NP_012788.2_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:188768-191086:- | gene-YKL134C_CENPK1137D | rna-NM_001179700.2_CENPK1137D | cds-NP_012788.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:186753-189071:- | gene-YKL134C_EthanolRed | rna-NM_001179700.2_EthanolRed | cds-NP_012788.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:187565-189883:- | gene-YKL134C_FaliES1 | rna-NM_001179700.2_FaliES1 | cds-NP_012788.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:9895-12213:- | gene-YKL134C_JAY291 | rna-NM_001179700.2_JAY291 | cds-NP_012788.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:195784-198102:- | gene-YKL134C_MUCL30387 | rna-NM_001179700.2_MUCL30387 | cds-NP_012788.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:190135-192453:- | gene-YKL134C_MUCL30388 | rna-NM_001179700.2_MUCL30388 | cds-NP_012788.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:188050-190368:- | gene-YKL134C_MUCL39482 | rna-NM_001179700.2_MUCL39482 | cds-NP_012788.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:192444-194762:- | gene-YKL134C_MUCL42920 | rna-NM_001179700.2_MUCL42920 | cds-NP_012788.2_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:189113-191431:- | gene-YKL134C_NCIM3186 | rna-NM_001179700.2_NCIM3186 | cds-NP_012788.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:188240-190558:- | gene-YKL134C_NCYC1407 | rna-NM_001179700.2_NCYC1407 | cds-NP_012788.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:195363-197681:- | gene-YKL134C_PE2H3 | rna-NM_001179700.2_PE2H3 | cds-NP_012788.2_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:191651-193969:- | gene-YKL134C_PE2H4 | rna-NM_001179700.2_PE2H4 | cds-NP_012788.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:189124-191442:- | gene-YKL134C_S288C | rna-NM_001179700.2_S288C | cds-NP_012788.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:105592-107910:- | gene-YKL134C_SA1 | rna-NM_001179700.2_SA1 | cds-NP_012788.2_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:188265-190583:- | gene-YKL134C_ThermosaccDry | rna-NM_001179700.2_ThermosaccDry | cds-NP_012788.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:187621-189939:- | gene-YKL134C_VR1 | rna-NM_001179700.2_VR1 | cds-NP_012788.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:186798-189116:- | gene-YKL134C_ZTW1 | rna-NM_001179700.2_ZTW1 | cds-NP_012788.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:203499-205817:- | gene-YKL134C_Sparadoxus | rna-NM_001179700.2_Sparadoxus | cds-NP_012788.2_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |