Gene name: OCA5
Reference locus (S288C): YHL029C
Gene biotype: protein_coding
Description: Oxidant-induced cell-cycle arrest protein 5; Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying replication of positive-strand RNA viruses in their natural hosts; Belongs to the OCA5 family
Top 10 interactors (score): OCA4 (0.966); OCA1 (0.94); OCA2 (0.935); SIW14 (0.886); OCA6 (0.821); YEL008W (0.775); YMR031W-A (0.747); OPI8 (0.745); YGL260W (0.712); YHL005C (0.712); ANY1 (0.659); YGL242C (0.64); YDR132C (0.64); YDL109C (0.621); MPO1 (0.617); YCR101C (0.616); DSD1 (0.612); POF1 (0.611); INA22 (0.61); VPS55 (0.579)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:40779-42818:- | gene-YHL029C_AKU4011 | rna-NM_001179109.1_AKU4011 | cds-NP_011834.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:33948-35987:+ | gene-YHL029C_BG1 | rna-NM_001179109.1_BG1 | cds-NP_011834.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:47438-49477:- | gene-YHL029C_Bruggeman | rna-NM_001179109.1_Bruggeman | cds-NP_011834.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:41702-43741:- | gene-YHL029C_CAT1 | rna-NM_001179109.1_CAT1 | cds-NP_011834.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:41383-43422:- | gene-YHL029C_CBS1585 | rna-NM_001179109.1_CBS1585 | cds-NP_011834.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:33964-36003:- | gene-YHL029C_CBS436 | rna-NM_001179109.1_CBS436 | cds-NP_011834.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:41331-43370:- | gene-YHL029C_CBS6412 | rna-NM_001179109.1_CBS6412 | cds-NP_011834.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:40797-42836:- | gene-YHL029C_CBS6413 | rna-NM_001179109.1_CBS6413 | cds-NP_011834.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:39090-41129:- | gene-YHL029C_CENPK1137D | rna-NM_001179109.1_CENPK1137D | cds-NP_011834.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:41010-43049:- | gene-YHL029C_EthanolRed | rna-NM_001179109.1_EthanolRed | cds-NP_011834.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:41334-43373:- | gene-YHL029C_FaliES1 | rna-NM_001179109.1_FaliES1 | cds-NP_011834.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000003.1:10020-12059:- | gene-YHL029C_JAY291 | rna-NM_001179109.1_JAY291 | cds-NP_011834.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:43274-45313:- | gene-YHL029C_MUCL30387 | rna-NM_001179109.1_MUCL30387 | cds-NP_011834.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:45115-47154:- | gene-YHL029C_MUCL30388 | rna-NM_001179109.1_MUCL30388 | cds-NP_011834.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:40374-42413:- | gene-YHL029C_MUCL39482 | rna-NM_001179109.1_MUCL39482 | cds-NP_011834.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:44345-46384:- | gene-YHL029C_MUCL42920 | rna-NM_001179109.1_MUCL42920 | cds-NP_011834.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:45811-47850:- | gene-YHL029C_NCIM3186 | rna-NM_001179109.1_NCIM3186 | cds-NP_011834.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:39859-41898:- | gene-YHL029C_NCYC1407 | rna-NM_001179109.1_NCYC1407 | cds-NP_011834.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:36150-38189:- | gene-YHL029C_PE2H3 | rna-NM_001179109.1_PE2H3 | cds-NP_011834.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:43532-45571:- | gene-YHL029C_PE2H4 | rna-NM_001179109.1_PE2H4 | cds-NP_011834.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:45929-47968:- | gene-YHL029C_S288C | rna-NM_001179109.1_S288C | cds-NP_011834.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:30217-32256:- | gene-YHL029C_SA1 | rna-NM_001179109.1_SA1 | cds-NP_011834.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:42423-44462:- | gene-YHL029C_ThermosaccDry | rna-NM_001179109.1_ThermosaccDry | cds-NP_011834.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:47133-49172:- | gene-YHL029C_VR1 | rna-NM_001179109.1_VR1 | cds-NP_011834.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:33633-35672:- | gene-YHL029C_ZTW1 | rna-NM_001179109.1_ZTW1 | cds-NP_011834.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:39988-42027:- | gene-YHL029C_Sparadoxus | rna-NM_001179109.1_Sparadoxus | cds-NP_011834.1_Sparadoxus | 90.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |