Gene name: NVJ1
Reference locus (S288C): YHR195W
Gene biotype: protein_coding
Description: Nucleus-vacuole junction protein 1; Nuclear envelope protein; anchored to the nuclear inner membrane, that interacts with the vacuolar membrane protein Vac8p to promote formation of nucleus-vacuole junctions during piecemeal microautophagy of the nucleus (PMN)
Top 10 interactors (score): VAC8 (0.999); SWH1 (0.996); TSC13 (0.955); NVJ2 (0.847); NVJ3 (0.774); YOR342C (0.748); MDM1 (0.745); VPS13 (0.712); LAM6 (0.712); ATG39 (0.693); ATG13 (0.691); YPT35 (0.67); MCP1 (0.67); ATG11 (0.659); ATG19 (0.617); ATG26 (0.574); ATG8 (0.574); ATG15 (0.574); VPH1 (0.57); ICP55 (0.56)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:477827-478792:+ | gene-YHR195W_AKU4011 | rna-NM_001179326.3_AKU4011 | cds-NP_012065.3_AKU4011 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:38958-39923:- | gene-YHR195W_BG1 | rna-NM_001179326.3_BG1 | cds-NP_012065.3_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:485068-486033:+ | gene-YHR195W_Bruggeman | rna-NM_001179326.3_Bruggeman | cds-NP_012065.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:481350-482315:+ | gene-YHR195W_CAT1 | rna-NM_001179326.3_CAT1 | cds-NP_012065.3_CAT1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:477279-478244:+ | gene-YHR195W_CBS1585 | rna-NM_001179326.3_CBS1585 | cds-NP_012065.3_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:475218-476183:+ | gene-YHR195W_CBS436 | rna-NM_001179326.3_CBS436 | cds-NP_012065.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:477378-478343:+ | gene-YHR195W_CBS6412 | rna-NM_001179326.3_CBS6412 | cds-NP_012065.3_CBS6412 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:478669-479634:+ | gene-YHR195W_CBS6413 | rna-NM_001179326.3_CBS6413 | cds-NP_012065.3_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:483933-484898:+ | gene-YHR195W_CENPK1137D | rna-NM_001179326.3_CENPK1137D | cds-NP_012065.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:536365-537330:+ | gene-YHR195W_EthanolRed | rna-NM_001179326.3_EthanolRed | cds-NP_012065.3_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:478809-479774:+ | gene-YHR195W_FaliES1 | rna-NM_001179326.3_FaliES1 | cds-NP_012065.3_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:23968-24933:+ | gene-YHR195W_JAY291 | rna-NM_001179326.3_JAY291 | cds-NP_012065.3_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:486394-487359:+ | gene-YHR195W_MUCL30387 | rna-NM_001179326.3_MUCL30387 | cds-NP_012065.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:485817-486782:+ | gene-YHR195W_MUCL30388 | rna-NM_001179326.3_MUCL30388 | cds-NP_012065.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:477190-478155:+ | gene-YHR195W_MUCL39482 | rna-NM_001179326.3_MUCL39482 | cds-NP_012065.3_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:485134-486099:+ | gene-YHR195W_MUCL42920 | rna-NM_001179326.3_MUCL42920 | cds-NP_012065.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:490629-491594:+ | gene-YHR195W_NCIM3186 | rna-NM_001179326.3_NCIM3186 | cds-NP_012065.3_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:479653-480618:+ | gene-YHR195W_NCYC1407 | rna-NM_001179326.3_NCYC1407 | cds-NP_012065.3_NCYC1407 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:478808-479773:+ | gene-YHR195W_PE2H3 | rna-NM_001179326.3_PE2H3 | cds-NP_012065.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:486235-487200:+ | gene-YHR195W_PE2H4 | rna-NM_001179326.3_PE2H4 | cds-NP_012065.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:490747-491712:+ | gene-YHR195W_S288C | rna-NM_001179326.3_S288C | cds-NP_012065.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:38894-39859:+ | gene-YHR195W_SA1 | rna-NM_001179326.3_SA1 | cds-NP_012065.3_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:479892-480857:+ | gene-YHR195W_ThermosaccDry | rna-NM_001179326.3_ThermosaccDry | cds-NP_012065.3_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:489110-490075:+ | gene-YHR195W_VR1 | rna-NM_001179326.3_VR1 | cds-NP_012065.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:470126-471091:+ | gene-YHR195W_ZTW1 | rna-NM_001179326.3_ZTW1 | cds-NP_012065.3_ZTW1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:476835-477800:+ | gene-YHR195W_Sparadoxus | rna-NM_001179326.3_Sparadoxus | cds-NP_012065.3_Sparadoxus | 87.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |