Gene name: NUT1
Reference locus (S288C): YGL151W
Gene biotype: protein_coding
Description: Mediator of rna polymerase ii transcription subunit 5; Component of the RNA polymerase II mediator complex; mediator is required for transcriptional activation and also has a role in basal transcription
Top 10 interactors (score): MED2 (0.996); SIN4 (0.996); SRB7 (0.992); SSN8 (0.991); SRB8 (0.989); SRB5 (0.987); SSN2 (0.987); NUT2 (0.986); RGR1 (0.983); MED7 (0.982); SRB4 (0.981); MED1 (0.98); MED6 (0.979); CSE2 (0.978); SSN3 (0.975); ROX3 (0.975); GAL11 (0.971); SRB2 (0.963); PGD1 (0.958); SRB6 (0.931)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:220120-223518:+ | gene-YGL151W_AKU4011 | rna-NM_001181016.1_AKU4011 | cds-NP_011364.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:181442-184840:- | gene-YGL151W_BG1 | rna-NM_001181016.1_BG1 | cds-NP_011364.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:222263-225661:+ | gene-YGL151W_Bruggeman | rna-NM_001181016.1_Bruggeman | cds-NP_011364.1_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:218127-221525:+ | gene-YGL151W_CAT1 | rna-NM_001181016.1_CAT1 | cds-NP_011364.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:223502-226900:+ | gene-YGL151W_CBS1585 | rna-NM_001181016.1_CBS1585 | cds-NP_011364.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:218097-221495:+ | gene-YGL151W_CBS436 | rna-NM_001181016.1_CBS436 | cds-NP_011364.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:209712-213110:+ | gene-YGL151W_CBS6412 | rna-NM_001181016.1_CBS6412 | cds-NP_011364.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:218055-221453:+ | gene-YGL151W_CBS6413 | rna-NM_001181016.1_CBS6413 | cds-NP_011364.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:217786-221184:+ | gene-YGL151W_CENPK1137D | rna-NM_001181016.1_CENPK1137D | cds-NP_011364.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:210264-213662:+ | gene-YGL151W_EthanolRed | rna-NM_001181016.1_EthanolRed | cds-NP_011364.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:211510-214908:+ | gene-YGL151W_FaliES1 | rna-NM_001181016.1_FaliES1 | cds-NP_011364.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:61328-64725:+ | gene-YGL151W_JAY291 | rna-NM_001181016.1_JAY291 | cds-NP_011364.1_JAY291 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:219488-222886:+ | gene-YGL151W_MUCL30387 | rna-NM_001181016.1_MUCL30387 | cds-NP_011364.1_MUCL30387 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:222603-226001:+ | gene-YGL151W_MUCL30388 | rna-NM_001181016.1_MUCL30388 | cds-NP_011364.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:220283-223681:+ | gene-YGL151W_MUCL39482 | rna-NM_001181016.1_MUCL39482 | cds-NP_011364.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:222840-226238:+ | gene-YGL151W_MUCL42920 | rna-NM_001181016.1_MUCL42920 | cds-NP_011364.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:217524-220922:+ | gene-YGL151W_NCIM3186 | rna-NM_001181016.1_NCIM3186 | cds-NP_011364.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:211747-215145:+ | gene-YGL151W_NCYC1407 | rna-NM_001181016.1_NCYC1407 | cds-NP_011364.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:213630-217028:+ | gene-YGL151W_PE2H3 | rna-NM_001181016.1_PE2H3 | cds-NP_011364.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:218625-222023:+ | gene-YGL151W_PE2H4 | rna-NM_001181016.1_PE2H4 | cds-NP_011364.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:217524-220922:+ | gene-YGL151W_S288C | rna-NM_001181016.1_S288C | cds-NP_011364.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:33827-37225:- | gene-YGL151W_SA1 | rna-NM_001181016.1_SA1 | cds-NP_011364.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:211739-215137:+ | gene-YGL151W_ThermosaccDry | rna-NM_001181016.1_ThermosaccDry | cds-NP_011364.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:218544-221942:+ | gene-YGL151W_VR1 | rna-NM_001181016.1_VR1 | cds-NP_011364.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:209843-213241:+ | gene-YGL151W_ZTW1 | rna-NM_001181016.1_ZTW1 | cds-NP_011364.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:215927-219331:+ | gene-YGL151W_Sparadoxus | rna-NM_001181016.1_Sparadoxus | cds-NP_011364.1_Sparadoxus | 89.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |