Gene name: NUP192
Reference locus (S288C): YJL039C
Gene biotype: protein_coding
Description: Nucleoporin NUP192; Essential subunit of inner ring of nuclear pore complex (NPC); plays a role in modulating transport through the NPC; homologous to human NUP205
Top 10 interactors (score): NIC96 (0.999); NUP157 (0.999); NUP188 (0.999); NUP170 (0.999); NSP1 (0.999); NUP133 (0.999); NUP57 (0.998); NUP145 (0.997); NUP116 (0.997); NUP85 (0.994); NUP84 (0.994); SEH1 (0.993); NUP100 (0.993); NUP2 (0.991); NUP53 (0.99); SEC13 (0.989); ASM4 (0.987); GLE2 (0.987); GLE1 (0.984); MEX67 (0.978)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:351158-356209:- | gene-YJL039C_AKU4011 | rna-NM_001181473.1_AKU4011 | cds-NP_012495.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:257328-262379:+ | gene-YJL039C_BG1 | rna-NM_001181473.1_BG1 | cds-NP_012495.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:365150-370201:- | gene-YJL039C_Bruggeman | rna-NM_001181473.1_Bruggeman | cds-NP_012495.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:369601-374652:- | gene-YJL039C_CAT1 | rna-NM_001181473.1_CAT1 | cds-NP_012495.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:362811-367862:- | gene-YJL039C_CBS1585 | rna-NM_001181473.1_CBS1585 | cds-NP_012495.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:381724-386775:- | gene-YJL039C_CBS436 | rna-NM_001181473.1_CBS436 | cds-NP_012495.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:351963-357014:- | gene-YJL039C_CBS6412 | rna-NM_001181473.1_CBS6412 | cds-NP_012495.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:353266-358317:- | gene-YJL039C_CBS6413 | rna-NM_001181473.1_CBS6413 | cds-NP_012495.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:350946-355997:- | gene-YJL039C_CENPK1137D | rna-NM_001181473.1_CENPK1137D | cds-NP_012495.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:355362-360413:- | gene-YJL039C_EthanolRed | rna-NM_001181473.1_EthanolRed | cds-NP_012495.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:366821-371872:- | gene-YJL039C_FaliES1 | rna-NM_001181473.1_FaliES1 | cds-NP_012495.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000200.1:43009-48060:+ | gene-YJL039C_JAY291 | rna-NM_001181473.1_JAY291 | cds-NP_012495.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:365883-370934:- | gene-YJL039C_MUCL30387 | rna-NM_001181473.1_MUCL30387 | cds-NP_012495.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:361302-366353:- | gene-YJL039C_MUCL30388 | rna-NM_001181473.1_MUCL30388 | cds-NP_012495.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:356144-361195:- | gene-YJL039C_MUCL39482 | rna-NM_001181473.1_MUCL39482 | cds-NP_012495.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:362030-367081:- | gene-YJL039C_MUCL42920 | rna-NM_001181473.1_MUCL42920 | cds-NP_012495.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:368727-373778:- | gene-YJL039C_NCIM3186 | rna-NM_001181473.1_NCIM3186 | cds-NP_012495.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:354264-359315:- | gene-YJL039C_NCYC1407 | rna-NM_001181473.1_NCYC1407 | cds-NP_012495.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:366717-371768:- | gene-YJL039C_PE2H3 | rna-NM_001181473.1_PE2H3 | cds-NP_012495.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:366362-371413:- | gene-YJL039C_PE2H4 | rna-NM_001181473.1_PE2H4 | cds-NP_012495.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:368748-373799:- | gene-YJL039C_S288C | rna-NM_001181473.1_S288C | cds-NP_012495.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:164247-169298:- | gene-YJL039C_SA1 | rna-NM_001181473.1_SA1 | cds-NP_012495.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:360483-365534:- | gene-YJL039C_ThermosaccDry | rna-NM_001181473.1_ThermosaccDry | cds-NP_012495.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:362873-367924:- | gene-YJL039C_VR1 | rna-NM_001181473.1_VR1 | cds-NP_012495.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:341693-346744:- | gene-YJL039C_ZTW1 | rna-NM_001181473.1_ZTW1 | cds-NP_012495.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:353833-358884:+ | gene-YJL039C_Sparadoxus | rna-NM_001181473.1_Sparadoxus | cds-NP_012495.1_Sparadoxus | 90.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |