Gene name: NUP157
Reference locus (S288C): YER105C
Gene biotype: protein_coding
Description: Nucleoporin NUP157; Subunit of the inner ring of the nuclear pore complex (NPC); contributes to NPC assembly and tethering of DNA to the nuclear periphery; both Nup170p and NUP157p are similar to human Nup155p; NUP157 has a paralog, NUP170, that arose from the whole genome duplication; Belongs to the non-repetitive/WGA-negative nucleoporin family
Top 10 interactors (score): NUP188 (0.999); NUP192 (0.999); NUP53 (0.998); NIC96 (0.998); NUP133 (0.997); ASM4 (0.994); NUP84 (0.993); POM152 (0.99); NUP145 (0.99); SEC13 (0.988); NUP100 (0.987); GLE1 (0.985); SEH1 (0.985); NUP116 (0.984); NSP1 (0.983); NUP170 (0.982); NUP85 (0.982); NUP49 (0.972); NUP57 (0.972); NUP2 (0.97)
Homologues (species, bitscore): NUP155 (Homo sapiens, 175.6); Nup155 (Mus musculus, 183.0); nup155 (Danio rerio, 184.1); nup155 (Xenopus tropicalis, 184.9); Nup154 (Drosophila melanogaster, 152.9); npp-8 (Caenorhabditis elegans, 92.8); NUP155 (Arabidopsis thaliana, 75.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:361725-365900:- | gene-YER105C_AKU4011 | rna-NM_001178996.1_AKU4011 | cds-NP_011031.1_AKU4011 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:59707-63882:+ | gene-YER105C_BG1 | rna-NM_001178996.1_BG1 | cds-NP_011031.1_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:372199-376374:- | gene-YER105C_Bruggeman | rna-NM_001178996.1_Bruggeman | cds-NP_011031.1_Bruggeman | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:366483-370907:- | gene-YER105C_CAT1 | rna-NM_001178996.1_CAT1 | cds-NP_011031.1_CAT1 | 93.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:361120-365295:- | gene-YER105C_CBS1585 | rna-NM_001178996.1_CBS1585 | cds-NP_011031.1_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:363824-367999:- | gene-YER105C_CBS436 | rna-NM_001178996.1_CBS436 | cds-NP_011031.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:360194-364369:- | gene-YER105C_CBS6412 | rna-NM_001178996.1_CBS6412 | cds-NP_011031.1_CBS6412 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:367036-371211:- | gene-YER105C_CBS6413 | rna-NM_001178996.1_CBS6413 | cds-NP_011031.1_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:365613-369788:- | gene-YER105C_CENPK1137D | rna-NM_001178996.1_CENPK1137D | cds-NP_011031.1_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:361565-365740:- | gene-YER105C_EthanolRed | rna-NM_001178996.1_EthanolRed | cds-NP_011031.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:362046-366221:- | gene-YER105C_FaliES1 | rna-NM_001178996.1_FaliES1 | cds-NP_011031.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000174.1:25319-29494:+ | gene-YER105C_JAY291 | rna-NM_001178996.1_JAY291 | cds-NP_011031.1_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:369147-373322:- | gene-YER105C_MUCL30387 | rna-NM_001178996.1_MUCL30387 | cds-NP_011031.1_MUCL30387 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:364079-368254:- | gene-YER105C_MUCL30388 | rna-NM_001178996.1_MUCL30388 | cds-NP_011031.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:360144-364319:- | gene-YER105C_MUCL39482 | rna-NM_001178996.1_MUCL39482 | cds-NP_011031.1_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:368636-372811:- | gene-YER105C_MUCL42920 | rna-NM_001178996.1_MUCL42920 | cds-NP_011031.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:367837-372012:- | gene-YER105C_NCIM3186 | rna-NM_001178996.1_NCIM3186 | cds-NP_011031.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:365677-369852:- | gene-YER105C_NCYC1407 | rna-NM_001178996.1_NCYC1407 | cds-NP_011031.1_NCYC1407 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:376217-380392:- | gene-YER105C_PE2H3 | rna-NM_001178996.1_PE2H3 | cds-NP_011031.1_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:366158-370333:- | gene-YER105C_PE2H4 | rna-NM_001178996.1_PE2H4 | cds-NP_011031.1_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:367838-372013:- | gene-YER105C_S288C | rna-NM_001178996.1_S288C | cds-NP_011031.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:77457-81632:- | gene-YER105C_SA1 | rna-NM_001178996.1_SA1 | cds-NP_011031.1_SA1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:362843-367018:- | gene-YER105C_ThermosaccDry | rna-NM_001178996.1_ThermosaccDry | cds-NP_011031.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:363905-368080:- | gene-YER105C_VR1 | rna-NM_001178996.1_VR1 | cds-NP_011031.1_VR1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:359970-364145:- | gene-YER105C_ZTW1 | rna-NM_001178996.1_ZTW1 | cds-NP_011031.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:363916-368091:- | gene-YER105C_Sparadoxus | rna-NM_001178996.1_Sparadoxus | cds-NP_011031.1_Sparadoxus | 86.9 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |