Gene name: NUP133
Reference locus (S288C): YKR082W
Gene biotype: protein_coding
Description: Nucleoporin NUP133; Subunit of Nup84p subcomplex of nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis; is involved in establishment of a normal nucleocytoplasmic concentration gradient of GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at nuclear periphery, including double-strand break repair, transcription and chromatin silencing; relocalizes to cytosol in response to hypoxia; homolog of human NUP133; Belongs to the nucleoporin Nup133 family
Top 10 interactors (score): NUP145 (0.999); NUP120 (0.999); SEC13 (0.999); SEH1 (0.999); NUP85 (0.999); NUP192 (0.999); NUP84 (0.999); NUP157 (0.997); NUP170 (0.997); NUP2 (0.995); NSP1 (0.992); NIC96 (0.992); NUP100 (0.989); CFT1 (0.988); NUP159 (0.988); NUP116 (0.988); NUP188 (0.987); MEX67 (0.987); NUP57 (0.983); NUP49 (0.981)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:578855-582328:+ | gene-YKR082W_AKU4011 | rna-NM_001179872.3_AKU4011 | cds-NP_013008.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:61897-65370:- | gene-YKR082W_BG1 | rna-NM_001179872.3_BG1 | cds-NP_013008.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:601433-604906:+ | gene-YKR082W_Bruggeman | rna-NM_001179872.3_Bruggeman | cds-NP_013008.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:597354-600827:+ | gene-YKR082W_CAT1 | rna-NM_001179872.3_CAT1 | cds-NP_013008.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:591342-594815:+ | gene-YKR082W_CBS1585 | rna-NM_001179872.3_CBS1585 | cds-NP_013008.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:589727-593200:+ | gene-YKR082W_CBS436 | rna-NM_001179872.3_CBS436 | cds-NP_013008.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:574630-578103:+ | gene-YKR082W_CBS6412 | rna-NM_001179872.3_CBS6412 | cds-NP_013008.3_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:591160-594633:+ | gene-YKR082W_CBS6413 | rna-NM_001179872.3_CBS6413 | cds-NP_013008.3_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:592480-595953:+ | gene-YKR082W_CENPK1137D | rna-NM_001179872.3_CENPK1137D | cds-NP_013008.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:588667-592140:+ | gene-YKR082W_EthanolRed | rna-NM_001179872.3_EthanolRed | cds-NP_013008.3_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:592562-596035:+ | gene-YKR082W_FaliES1 | rna-NM_001179872.3_FaliES1 | cds-NP_013008.3_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:48899-52372:- | gene-YKR082W_JAY291 | rna-NM_001179872.3_JAY291 | cds-NP_013008.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:600929-604402:+ | gene-YKR082W_MUCL30387 | rna-NM_001179872.3_MUCL30387 | cds-NP_013008.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:595272-598745:+ | gene-YKR082W_MUCL30388 | rna-NM_001179872.3_MUCL30388 | cds-NP_013008.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:590183-593656:+ | gene-YKR082W_MUCL39482 | rna-NM_001179872.3_MUCL39482 | cds-NP_013008.3_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:596206-599679:+ | gene-YKR082W_MUCL42920 | rna-NM_001179872.3_MUCL42920 | cds-NP_013008.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:592814-596287:+ | gene-YKR082W_NCIM3186 | rna-NM_001179872.3_NCIM3186 | cds-NP_013008.3_NCIM3186 | 94.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:590595-594068:+ | gene-YKR082W_NCYC1407 | rna-NM_001179872.3_NCYC1407 | cds-NP_013008.3_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:615800-619273:+ | gene-YKR082W_PE2H3 | rna-NM_001179872.3_PE2H3 | cds-NP_013008.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:600204-603677:+ | gene-YKR082W_PE2H4 | rna-NM_001179872.3_PE2H4 | cds-NP_013008.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:592825-596298:+ | gene-YKR082W_S288C | rna-NM_001179872.3_S288C | cds-NP_013008.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:85551-89024:- | gene-YKR082W_SA1 | rna-NM_001179872.3_SA1 | cds-NP_013008.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:591809-595282:+ | gene-YKR082W_ThermosaccDry | rna-NM_001179872.3_ThermosaccDry | cds-NP_013008.3_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:591071-594544:+ | gene-YKR082W_VR1 | rna-NM_001179872.3_VR1 | cds-NP_013008.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:588790-592263:+ | gene-YKR082W_ZTW1 | rna-NM_001179872.3_ZTW1 | cds-NP_013008.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:614041-617514:+ | gene-YKR082W_Sparadoxus | rna-NM_001179872.3_Sparadoxus | cds-NP_013008.3_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |