Gene name: NUG1
Reference locus (S288C): YER006W
Gene biotype: protein_coding
Description: Nuclear GTP-binding protein NUG1; GTPase that associates with nuclear 60S pre-ribosomes; required for export of 60S ribosomal subunits from the nucleus
Top 10 interactors (score): MRT4 (0.999); NOC3 (0.999); NOP56 (0.999); CGR1 (0.999); NOP15 (0.999); RPF2 (0.999); IPI1 (0.999); NOP2 (0.999); RRS1 (0.999); RPF1 (0.999); YTM1 (0.999); SPB1 (0.999); NSA1 (0.999); DRS1 (0.999); RLP24 (0.999); RRP1 (0.999); NSA2 (0.999); NOG2 (0.999); HAS1 (0.999); RRP12 (0.999)
Homologues (species, bitscore): GNL3 (Homo sapiens, 186.8); Gnl3l (Mus musculus, 180.6); gnl3l (Danio rerio, 221.9); gnl3l (Xenopus tropicalis, 179.9); Ns1 (Drosophila melanogaster, 228.8); nst-1 (Caenorhabditis elegans, 230.3); NSN1 (Arabidopsis thaliana, 217.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:156412-157974:+ | gene-YER006W_AKU4011 | rna-NM_001178897.1_AKU4011 | cds-NP_010921.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:267708-269270:- | gene-YER006W_BG1 | rna-NM_001178897.1_BG1 | cds-NP_010921.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:164099-165661:+ | gene-YER006W_Bruggeman | rna-NM_001178897.1_Bruggeman | cds-NP_010921.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:159330-160892:+ | gene-YER006W_CAT1 | rna-NM_001178897.1_CAT1 | cds-NP_010921.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:156721-158283:+ | gene-YER006W_CBS1585 | rna-NM_001178897.1_CBS1585 | cds-NP_010921.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:157990-159552:+ | gene-YER006W_CBS436 | rna-NM_001178897.1_CBS436 | cds-NP_010921.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:156615-158177:+ | gene-YER006W_CBS6412 | rna-NM_001178897.1_CBS6412 | cds-NP_010921.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:161261-162823:+ | gene-YER006W_CBS6413 | rna-NM_001178897.1_CBS6413 | cds-NP_010921.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:160549-162111:+ | gene-YER006W_CENPK1137D | rna-NM_001178897.1_CENPK1137D | cds-NP_010921.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:157076-158638:+ | gene-YER006W_EthanolRed | rna-NM_001178897.1_EthanolRed | cds-NP_010921.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:157336-158898:+ | gene-YER006W_FaliES1 | rna-NM_001178897.1_FaliES1 | cds-NP_010921.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:24305-25867:+ | gene-YER006W_JAY291 | rna-NM_001178897.1_JAY291 | cds-NP_010921.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:160636-162198:+ | gene-YER006W_MUCL30387 | rna-NM_001178897.1_MUCL30387 | cds-NP_010921.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:157157-158719:+ | gene-YER006W_MUCL30388 | rna-NM_001178897.1_MUCL30388 | cds-NP_010921.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:155757-157319:+ | gene-YER006W_MUCL39482 | rna-NM_001178897.1_MUCL39482 | cds-NP_010921.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:161629-163191:+ | gene-YER006W_MUCL42920 | rna-NM_001178897.1_MUCL42920 | cds-NP_010921.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:162722-164284:+ | gene-YER006W_NCIM3186 | rna-NM_001178897.1_NCIM3186 | cds-NP_010921.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:160831-162393:+ | gene-YER006W_NCYC1407 | rna-NM_001178897.1_NCYC1407 | cds-NP_010921.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:165132-166694:+ | gene-YER006W_PE2H3 | rna-NM_001178897.1_PE2H3 | cds-NP_010921.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:161047-162609:+ | gene-YER006W_PE2H4 | rna-NM_001178897.1_PE2H4 | cds-NP_010921.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:162723-164285:+ | gene-YER006W_S288C | rna-NM_001178897.1_S288C | cds-NP_010921.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:79324-80886:- | gene-YER006W_SA1 | rna-NM_001178897.1_SA1 | cds-NP_010921.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:157742-159304:+ | gene-YER006W_ThermosaccDry | rna-NM_001178897.1_ThermosaccDry | cds-NP_010921.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:157223-158785:+ | gene-YER006W_VR1 | rna-NM_001178897.1_VR1 | cds-NP_010921.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:155772-157334:+ | gene-YER006W_ZTW1 | rna-NM_001178897.1_ZTW1 | cds-NP_010921.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:160487-162049:+ | gene-YER006W_Sparadoxus | rna-NM_001178897.1_Sparadoxus | cds-NP_010921.1_Sparadoxus | 92.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |