Gene name: NTG2
Reference locus (S288C): YOL043C
Gene biotype: protein_coding
Description: Endonuclease III homolog 2; DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase; involved in base excision repair, localizes to the nucleus; sumoylated; NTG2 has a paralog, NTG1, that arose from the whole genome duplication
Top 10 interactors (score): APN1 (0.996); APN2 (0.989); OGG1 (0.981); UNG1 (0.974); MLH1 (0.967); NTG1 (0.958); RAD14 (0.935); RAD27 (0.91); RAD1 (0.901); REV3 (0.9); RAD9 (0.88); RAD52 (0.869); REV1 (0.853); RAD10 (0.847); MRE11 (0.844); DUT1 (0.835); RAD3 (0.793); MET18 (0.768); CDC9 (0.76); PRI2 (0.747)
Homologues (species, bitscore): NTHL1 (Homo sapiens, 166.0); Nthl1 (Mus musculus, 173.3); nthl1 (Danio rerio, 174.5); nthl1 (Xenopus tropicalis, 160.2); CG9272 (Drosophila melanogaster, 177.2); nth-1 (Caenorhabditis elegans, 164.5); ATNTH1 (Arabidopsis thaliana, 175.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:232753-233895:- | gene-YOL043C_AKU4011 | rna-NM_001183297.1_AKU4011 | cds-NP_014599.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:48376-49518:- | gene-YOL043C_BG1 | rna-NM_001183297.1_BG1 | cds-NP_014599.1_BG1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:235609-236751:- | gene-YOL043C_Bruggeman | rna-NM_001183297.1_Bruggeman | cds-NP_014599.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:233466-234608:- | gene-YOL043C_CAT1 | rna-NM_001183297.1_CAT1 | cds-NP_014599.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:227423-228565:- | gene-YOL043C_CBS1585 | rna-NM_001183297.1_CBS1585 | cds-NP_014599.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:231703-232845:- | gene-YOL043C_CBS436 | rna-NM_001183297.1_CBS436 | cds-NP_014599.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:226787-227929:- | gene-YOL043C_CBS6412 | rna-NM_001183297.1_CBS6412 | cds-NP_014599.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:234306-235448:- | gene-YOL043C_CBS6413 | rna-NM_001183297.1_CBS6413 | cds-NP_014599.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:248093-249235:- | gene-YOL043C_CENPK1137D | rna-NM_001183297.1_CENPK1137D | cds-NP_014599.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:229744-230886:- | gene-YOL043C_EthanolRed | rna-NM_001183297.1_EthanolRed | cds-NP_014599.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:232660-233802:- | gene-YOL043C_FaliES1 | rna-NM_001183297.1_FaliES1 | cds-NP_014599.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:32659-33801:+ | gene-YOL043C_JAY291 | rna-NM_001183297.1_JAY291 | cds-NP_014599.1_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:238632-239773:- | gene-YOL043C_MUCL30387 | rna-NM_001183297.1_MUCL30387 | cds-NP_014599.1_MUCL30387 | 98.9 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:242982-244124:- | gene-YOL043C_MUCL30388 | rna-NM_001183297.1_MUCL30388 | cds-NP_014599.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:234908-236050:- | gene-YOL043C_MUCL39482 | rna-NM_001183297.1_MUCL39482 | cds-NP_014599.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:249843-250985:- | gene-YOL043C_MUCL42920 | rna-NM_001183297.1_MUCL42920 | cds-NP_014599.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:248281-249423:- | gene-YOL043C_NCIM3186 | rna-NM_001183297.1_NCIM3186 | cds-NP_014599.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:241652-242794:- | gene-YOL043C_NCYC1407 | rna-NM_001183297.1_NCYC1407 | cds-NP_014599.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:224070-225212:- | gene-YOL043C_PE2H3 | rna-NM_001183297.1_PE2H3 | cds-NP_014599.1_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:235044-236186:- | gene-YOL043C_PE2H4 | rna-NM_001183297.1_PE2H4 | cds-NP_014599.1_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:248392-249534:- | gene-YOL043C_S288C | rna-NM_001183297.1_S288C | cds-NP_014599.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:216392-217534:- | gene-YOL043C_SA1 | rna-NM_001183297.1_SA1 | cds-NP_014599.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:231231-232373:- | gene-YOL043C_ThermosaccDry | rna-NM_001183297.1_ThermosaccDry | cds-NP_014599.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:231295-232437:- | gene-YOL043C_VR1 | rna-NM_001183297.1_VR1 | cds-NP_014599.1_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:231098-232240:- | gene-YOL043C_ZTW1 | rna-NM_001183297.1_ZTW1 | cds-NP_014599.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:239486-240628:- | gene-YOL043C_Sparadoxus | rna-NM_001183297.1_Sparadoxus | cds-NP_014599.1_Sparadoxus | 89.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |