Gene name: NSL1
Reference locus (S288C): YPL233W
Gene biotype: protein_coding
Description: Kinetochore-associated protein NSL1; Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for accurate chromosome segregation; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)
Top 10 interactors (score): MTW1 (0.999); DSN1 (0.999); NNF1 (0.999); AME1 (0.979); SPC25 (0.961); SPC105 (0.956); SPC24 (0.941); OKP1 (0.93); CTF19 (0.898); CHL4 (0.897); CTF3 (0.878); MCM21 (0.843); NUF2 (0.822); CSE4 (0.795); MIF2 (0.778); MCM22 (0.767); CSM1 (0.75); KRE28 (0.748); ASK1 (0.729); MCM16 (0.707)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:83922-84572:+ | gene-YPL233W_AKU4011 | rna-NM_001184047.1_AKU4011 | cds-NP_015091.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:289863-290513:+ | gene-YPL233W_BG1 | rna-NM_001184047.1_BG1 | cds-NP_015091.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:109132-109782:+ | gene-YPL233W_Bruggeman | rna-NM_001184047.1_Bruggeman | cds-NP_015091.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:106169-106819:+ | gene-YPL233W_CAT1 | rna-NM_001184047.1_CAT1 | cds-NP_015091.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:88235-88885:+ | gene-YPL233W_CBS1585 | rna-NM_001184047.1_CBS1585 | cds-NP_015091.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:102654-103304:+ | gene-YPL233W_CBS436 | rna-NM_001184047.1_CBS436 | cds-NP_015091.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:93400-94050:+ | gene-YPL233W_CBS6412 | rna-NM_001184047.1_CBS6412 | cds-NP_015091.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:84385-85035:+ | gene-YPL233W_CBS6413 | rna-NM_001184047.1_CBS6413 | cds-NP_015091.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:106100-106750:+ | gene-YPL233W_CENPK1137D | rna-NM_001184047.1_CENPK1137D | cds-NP_015091.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:83321-83971:+ | gene-YPL233W_EthanolRed | rna-NM_001184047.1_EthanolRed | cds-NP_015091.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:90128-90778:+ | gene-YPL233W_FaliES1 | rna-NM_001184047.1_FaliES1 | cds-NP_015091.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000293.1:19747-20397:- | gene-YPL233W_JAY291 | rna-NM_001184047.1_JAY291 | cds-NP_015091.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:100970-101620:+ | gene-YPL233W_MUCL30387 | rna-NM_001184047.1_MUCL30387 | cds-NP_015091.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:99408-100058:+ | gene-YPL233W_MUCL30388 | rna-NM_001184047.1_MUCL30388 | cds-NP_015091.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:81365-82015:+ | gene-YPL233W_MUCL39482 | rna-NM_001184047.1_MUCL39482 | cds-NP_015091.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:100237-100887:+ | gene-YPL233W_MUCL42920 | rna-NM_001184047.1_MUCL42920 | cds-NP_015091.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:106155-106805:+ | gene-YPL233W_NCIM3186 | rna-NM_001184047.1_NCIM3186 | cds-NP_015091.1_NCIM3186 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:87811-88461:+ | gene-YPL233W_NCYC1407 | rna-NM_001184047.1_NCYC1407 | cds-NP_015091.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:95543-96193:+ | gene-YPL233W_PE2H3 | rna-NM_001184047.1_PE2H3 | cds-NP_015091.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:95186-95836:+ | gene-YPL233W_PE2H4 | rna-NM_001184047.1_PE2H4 | cds-NP_015091.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:106172-106822:+ | gene-YPL233W_S288C | rna-NM_001184047.1_S288C | cds-NP_015091.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:48051-48701:+ | gene-YPL233W_SA1 | rna-NM_001184047.1_SA1 | cds-NP_015091.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:90129-90779:+ | gene-YPL233W_ThermosaccDry | rna-NM_001184047.1_ThermosaccDry | cds-NP_015091.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:330008-330658:+ | gene-YPL233W_VR1 | rna-NM_001184047.1_VR1 | cds-NP_015091.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:89671-90321:+ | gene-YPL233W_ZTW1 | rna-NM_001184047.1_ZTW1 | cds-NP_015091.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:91173-91823:+ | gene-YPL233W_Sparadoxus | rna-NM_001184047.1_Sparadoxus | cds-NP_015091.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |